Gene : Glyma.12G203600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31692:SF5 - EXPANSIN-B1-RELATED Genomic Order:  2036
Name:  ? Glyma.12G203600 Secondary Identifier:  ? PAC:30548481
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G203600 0.5kb upstream 0.5kb upstream 4463 true Chr12: 36390283-36394745 Glycine max
Glyma.12G203600 0.5kb upstream 0.5kb upstream 500 false Chr12: 36394246-36394745 Glycine max
Glyma.12G203600 0.5kb downstream 0.5kb downstream 4463 true Chr12: 36389783-36394245 Glycine max
Glyma.12G203600 0.5kb downstream 0.5kb downstream 500 false Chr12: 36389783-36390282 Glycine max
Glyma.12G203600 1.0kb upstream 1.0kb upstream 4963 true Chr12: 36390283-36395245 Glycine max
Glyma.12G203600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36394246-36395245 Glycine max
Glyma.12G203600 1.0kb downstream 1.0kb downstream 4963 true Chr12: 36389283-36394245 Glycine max
Glyma.12G203600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36389283-36390282 Glycine max
Glyma.12G203600 2.0kb upstream 2.0kb upstream 5963 true Chr12: 36390283-36396245 Glycine max
Glyma.12G203600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36394246-36396245 Glycine max
Glyma.12G203600 2.0kb downstream 2.0kb downstream 5963 true Chr12: 36388283-36394245 Glycine max
Glyma.12G203600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36388283-36390282 Glycine max
Glyma.12G203600 5.0kb upstream 5.0kb upstream 8963 true Chr12: 36390283-36399245 Glycine max
Glyma.12G203600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36394246-36399245 Glycine max
Glyma.12G203600 5.0kb downstream 5.0kb downstream 8963 true Chr12: 36385283-36394245 Glycine max
Glyma.12G203600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36385283-36390282 Glycine max
Glyma.12G203600 10.0kb upstream 10.0kb upstream 13963 true Chr12: 36390283-36404245 Glycine max
Glyma.12G203600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36394246-36404245 Glycine max
Glyma.12G203600 10.0kb downstream 10.0kb downstream 13963 true Chr12: 36380283-36394245 Glycine max
Glyma.12G203600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36380283-36390282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040952 5273 Angiosperm View MSA
122296571 5265 Fabidae View MSA
124061780 5270 Rosid View MSA
123742041 5271 Pentapetalae View MSA
122787625 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.31345 0.0 7.7154    
cufflinks 6.73641 0.0 19.4659    
cufflinks 0.34325 0.0 1.3083   Low
cufflinks 14.1826 0.0 38.3347   High
cufflinks 2.52609 0.0 8.29995    
cufflinks 8.9464 0.0 24.9521    
cufflinks 8.38972 0.0 23.527    
cufflinks 3.79827 0.0 11.8413    
cufflinks 2.91236 0.0 9.405    
cufflinks 5.656        
cufflinks 0.13        
cufflinks 0.666        
cufflinks 1.586        
cufflinks 1.636        
cufflinks 0.005     Low Low
cufflinks 4.286        
cufflinks 0.204        
cufflinks 2.961        
cufflinks 3.857        
cufflinks 5.153        
cufflinks 0.167        
cufflinks 7.715     High High
cufflinks 4.555        
cufflinks 0.097       Low
cufflinks 6.115        
cufflinks 0.261        

0 Strain