Gene : Glyma.12G191200 G. max Wm82.a2.v1
Defline:  (1 of 8) PF02681 - Divergent PAP2 family (DUF212) Genomic Order:  1912
Name:  ? Glyma.12G191200 Secondary Identifier:  ? PAC:30545563
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G191200 0.5kb upstream 0.5kb upstream 5392 true Chr12: 35283380-35288771 Glycine max
Glyma.12G191200 0.5kb upstream 0.5kb upstream 500 false Chr12: 35283380-35283879 Glycine max
Glyma.12G191200 0.5kb downstream 0.5kb downstream 5392 true Chr12: 35283880-35289271 Glycine max
Glyma.12G191200 0.5kb downstream 0.5kb downstream 500 false Chr12: 35288772-35289271 Glycine max
Glyma.12G191200 1.0kb upstream 1.0kb upstream 5892 true Chr12: 35282880-35288771 Glycine max
Glyma.12G191200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35282880-35283879 Glycine max
Glyma.12G191200 1.0kb downstream 1.0kb downstream 5892 true Chr12: 35283880-35289771 Glycine max
Glyma.12G191200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35288772-35289771 Glycine max
Glyma.12G191200 2.0kb upstream 2.0kb upstream 6892 true Chr12: 35281880-35288771 Glycine max
Glyma.12G191200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35281880-35283879 Glycine max
Glyma.12G191200 2.0kb downstream 2.0kb downstream 6892 true Chr12: 35283880-35290771 Glycine max
Glyma.12G191200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35288772-35290771 Glycine max
Glyma.12G191200 5.0kb upstream 5.0kb upstream 9892 true Chr12: 35278880-35288771 Glycine max
Glyma.12G191200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35278880-35283879 Glycine max
Glyma.12G191200 5.0kb downstream 5.0kb downstream 9892 true Chr12: 35283880-35293771 Glycine max
Glyma.12G191200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35288772-35293771 Glycine max
Glyma.12G191200 10.0kb upstream 10.0kb upstream 14892 true Chr12: 35273880-35288771 Glycine max
Glyma.12G191200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35273880-35283879 Glycine max
Glyma.12G191200 10.0kb downstream 10.0kb downstream 14892 true Chr12: 35283880-35298771 Glycine max
Glyma.12G191200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35288772-35298771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307761 5265 Fabidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6514 0.0 50.9004    
cufflinks 16.7827 0.0 46.1359    
cufflinks 13.6724 0.0 38.3134    
cufflinks 21.5313 0.0 58.272 High High
cufflinks 9.56577 0.0 27.8384   Low
cufflinks 11.4134 0.0 32.5432    
cufflinks 19.1467 0.0 52.1758    
cufflinks 13.4677 0.0 37.714    
cufflinks 12.7218 0.0 35.817    
cufflinks 3.213        
cufflinks 1.547        
cufflinks 2.622        
cufflinks 0.674       Low
cufflinks 0.81       Low
cufflinks 1.264       Low
cufflinks 3.389        
cufflinks 2.179        
cufflinks 3.521        
cufflinks 2.706        
cufflinks 4.823       High
cufflinks 1.809        
cufflinks 4.81       High
cufflinks 2.258        
cufflinks 2.037        
cufflinks 3.987       High
cufflinks 1.701        

0 Strain