Gene : Glyma.12G178100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  1781
Name:  ? Glyma.12G178100 Secondary Identifier:  ? PAC:30548378
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G178100 0.5kb upstream 0.5kb upstream 3120 true Chr12: 33749695-33752814 Glycine max
Glyma.12G178100 0.5kb upstream 0.5kb upstream 500 false Chr12: 33752315-33752814 Glycine max
Glyma.12G178100 0.5kb downstream 0.5kb downstream 3120 true Chr12: 33749195-33752314 Glycine max
Glyma.12G178100 0.5kb downstream 0.5kb downstream 500 false Chr12: 33749195-33749694 Glycine max
Glyma.12G178100 1.0kb upstream 1.0kb upstream 3620 true Chr12: 33749695-33753314 Glycine max
Glyma.12G178100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33752315-33753314 Glycine max
Glyma.12G178100 1.0kb downstream 1.0kb downstream 3620 true Chr12: 33748695-33752314 Glycine max
Glyma.12G178100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33748695-33749694 Glycine max
Glyma.12G178100 2.0kb upstream 2.0kb upstream 4620 true Chr12: 33749695-33754314 Glycine max
Glyma.12G178100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33752315-33754314 Glycine max
Glyma.12G178100 2.0kb downstream 2.0kb downstream 4620 true Chr12: 33747695-33752314 Glycine max
Glyma.12G178100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33747695-33749694 Glycine max
Glyma.12G178100 5.0kb upstream 5.0kb upstream 7620 true Chr12: 33749695-33757314 Glycine max
Glyma.12G178100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33752315-33757314 Glycine max
Glyma.12G178100 5.0kb downstream 5.0kb downstream 7620 true Chr12: 33744695-33752314 Glycine max
Glyma.12G178100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33744695-33749694 Glycine max
Glyma.12G178100 10.0kb upstream 10.0kb upstream 12620 true Chr12: 33749695-33762314 Glycine max
Glyma.12G178100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33752315-33762314 Glycine max
Glyma.12G178100 10.0kb downstream 10.0kb downstream 12620 true Chr12: 33739695-33752314 Glycine max
Glyma.12G178100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33739695-33749694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314600 5265 Fabidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.23275 0.0 1.15202   Low
cufflinks 1.27056 0.0 6.54846    
cufflinks 0.23977 0.0 1.17265   Low
cufflinks 3.46089 0.0 15.5567    
cufflinks 4.35176 0.0 17.7239    
cufflinks 5.31893 0.0 17.5725    
cufflinks 0.46298 0.0 2.1231    
cufflinks 5.55313 0.0 18.2201    
cufflinks 6.53157 0.0 24.0717    
cufflinks 2.011       High
cufflinks 0.108        
cufflinks 0.405        
cufflinks 2.899       High
cufflinks 2.542       High
cufflinks 0.892        
cufflinks 0.225        
cufflinks 0.297        
cufflinks 0.728        
cufflinks 0.655        
cufflinks 0.197        
cufflinks 0.223        
cufflinks 0.168        
cufflinks 0.052     Low Low
cufflinks 0.061       Low
cufflinks 0.147        
cufflinks 0.25        

0 Strain