Gene : Glyma.12G179600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11010//PTHR11010:SF43 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED Genomic Order:  1796
Name:  ? Glyma.12G179600 Secondary Identifier:  ? PAC:30545409
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G179600 0.5kb upstream 0.5kb upstream 6363 true Chr12: 33985877-33992239 Glycine max
Glyma.12G179600 0.5kb upstream 0.5kb upstream 500 false Chr12: 33985877-33986376 Glycine max
Glyma.12G179600 0.5kb downstream 0.5kb downstream 6363 true Chr12: 33986377-33992739 Glycine max
Glyma.12G179600 0.5kb downstream 0.5kb downstream 500 false Chr12: 33992240-33992739 Glycine max
Glyma.12G179600 1.0kb upstream 1.0kb upstream 6863 true Chr12: 33985377-33992239 Glycine max
Glyma.12G179600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33985377-33986376 Glycine max
Glyma.12G179600 1.0kb downstream 1.0kb downstream 6863 true Chr12: 33986377-33993239 Glycine max
Glyma.12G179600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33992240-33993239 Glycine max
Glyma.12G179600 2.0kb upstream 2.0kb upstream 7863 true Chr12: 33984377-33992239 Glycine max
Glyma.12G179600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33984377-33986376 Glycine max
Glyma.12G179600 2.0kb downstream 2.0kb downstream 7863 true Chr12: 33986377-33994239 Glycine max
Glyma.12G179600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33992240-33994239 Glycine max
Glyma.12G179600 5.0kb upstream 5.0kb upstream 10863 true Chr12: 33981377-33992239 Glycine max
Glyma.12G179600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33981377-33986376 Glycine max
Glyma.12G179600 5.0kb downstream 5.0kb downstream 10863 true Chr12: 33986377-33997239 Glycine max
Glyma.12G179600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33992240-33997239 Glycine max
Glyma.12G179600 10.0kb upstream 10.0kb upstream 15863 true Chr12: 33976377-33992239 Glycine max
Glyma.12G179600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33976377-33986376 Glycine max
Glyma.12G179600 10.0kb downstream 10.0kb downstream 15863 true Chr12: 33986377-34002239 Glycine max
Glyma.12G179600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33992240-34002239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310365 5265 Fabidae View MSA
124071950 5270 Rosid View MSA
123748815 5271 Pentapetalae View MSA
122796737 5272 Eudicot View MSA
122049838 5273 Angiosperm View MSA
121344690 5274 Embryophyte View MSA
123428837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.73247 0.0 26.6019   High
cufflinks 1.35577 0.0 4.70455    
cufflinks 0.696694 0.0 2.53284    
cufflinks 1.51963 0.0 5.20936    
cufflinks 0.889672 0.0 3.1941    
cufflinks 0.517445 0.0 1.91617    
cufflinks 2.47367 0.0 8.00032    
cufflinks 1.83993 0.0 6.17463    
cufflinks 0.0265149 0.0 0.113003 Low Low
cufflinks 1.627        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.657        
cufflinks 0.033     Low  
cufflinks 0.095        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.064        
cufflinks 0.02     Low  
cufflinks 0.755        
cufflinks 0.768        
cufflinks 0.845        
cufflinks 0.003     Low Low
cufflinks 1.098        
cufflinks 1.356        
cufflinks 0.041     Low  
cufflinks 0.913        
cufflinks 0.002     Low Low

0 Strain