Gene : Glyma.12G228600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11019:SF100 - PROTEIN DJ-1 Genomic Order:  2286
Name:  ? Glyma.12G228600 Secondary Identifier:  ? PAC:30548747
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G228600 0.5kb upstream 0.5kb upstream 4148 true Chr12: 38853910-38858057 Glycine max
Glyma.12G228600 0.5kb upstream 0.5kb upstream 500 false Chr12: 38857558-38858057 Glycine max
Glyma.12G228600 0.5kb downstream 0.5kb downstream 4148 true Chr12: 38853410-38857557 Glycine max
Glyma.12G228600 0.5kb downstream 0.5kb downstream 500 false Chr12: 38853410-38853909 Glycine max
Glyma.12G228600 1.0kb upstream 1.0kb upstream 4648 true Chr12: 38853910-38858557 Glycine max
Glyma.12G228600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38857558-38858557 Glycine max
Glyma.12G228600 1.0kb downstream 1.0kb downstream 4648 true Chr12: 38852910-38857557 Glycine max
Glyma.12G228600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38852910-38853909 Glycine max
Glyma.12G228600 2.0kb upstream 2.0kb upstream 5648 true Chr12: 38853910-38859557 Glycine max
Glyma.12G228600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38857558-38859557 Glycine max
Glyma.12G228600 2.0kb downstream 2.0kb downstream 5648 true Chr12: 38851910-38857557 Glycine max
Glyma.12G228600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38851910-38853909 Glycine max
Glyma.12G228600 5.0kb upstream 5.0kb upstream 8648 true Chr12: 38853910-38862557 Glycine max
Glyma.12G228600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38857558-38862557 Glycine max
Glyma.12G228600 5.0kb downstream 5.0kb downstream 8648 true Chr12: 38848910-38857557 Glycine max
Glyma.12G228600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38848910-38853909 Glycine max
Glyma.12G228600 10.0kb upstream 10.0kb upstream 13648 true Chr12: 38853910-38867557 Glycine max
Glyma.12G228600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38857558-38867557 Glycine max
Glyma.12G228600 10.0kb downstream 10.0kb downstream 13648 true Chr12: 38843910-38857557 Glycine max
Glyma.12G228600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38843910-38853909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303819 5265 Fabidae View MSA
124063705 5270 Rosid View MSA
123739735 5271 Pentapetalae View MSA
122788199 5272 Eudicot View MSA
122047245 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.36 0.0 43.6467    
cufflinks 15.5187 0.0 41.4088    
cufflinks 6.92788 0.0 19.1917   Low
cufflinks 30.9876 0.0 84.4806 High High
cufflinks 17.3297 0.0 46.2482    
cufflinks 9.19223 0.0 24.9165   Low
cufflinks 42.7731 0.0 119.946 High High
cufflinks 18.5278 0.0 49.4783    
cufflinks 13.8977 0.0 37.1172    
cufflinks 6.135        
cufflinks 0.658       Low
cufflinks 5.748        
cufflinks 5.21        
cufflinks 5.046        
cufflinks 1.894        
cufflinks 6.406        
cufflinks 3.864        
cufflinks 5.686        
cufflinks 7.526     High  
cufflinks 6.216        
cufflinks 1.431       Low
cufflinks 5.959        
cufflinks 6.956        
cufflinks 0.85       Low
cufflinks 6.181        
cufflinks 3.336        

0 Strain