Gene : Glyma.12G231600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33510:SF2 - PROTEIN TIC 20-IV, CHLOROPLASTIC Genomic Order:  2316
Name:  ? Glyma.12G231600 Secondary Identifier:  ? PAC:30546886
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G231600 0.5kb upstream 0.5kb upstream 2623 true Chr12: 39156711-39159333 Glycine max
Glyma.12G231600 0.5kb upstream 0.5kb upstream 500 false Chr12: 39156711-39157210 Glycine max
Glyma.12G231600 0.5kb downstream 0.5kb downstream 2623 true Chr12: 39157211-39159833 Glycine max
Glyma.12G231600 0.5kb downstream 0.5kb downstream 500 false Chr12: 39159334-39159833 Glycine max
Glyma.12G231600 1.0kb upstream 1.0kb upstream 3123 true Chr12: 39156211-39159333 Glycine max
Glyma.12G231600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 39156211-39157210 Glycine max
Glyma.12G231600 1.0kb downstream 1.0kb downstream 3123 true Chr12: 39157211-39160333 Glycine max
Glyma.12G231600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 39159334-39160333 Glycine max
Glyma.12G231600 2.0kb upstream 2.0kb upstream 4123 true Chr12: 39155211-39159333 Glycine max
Glyma.12G231600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 39155211-39157210 Glycine max
Glyma.12G231600 2.0kb downstream 2.0kb downstream 4123 true Chr12: 39157211-39161333 Glycine max
Glyma.12G231600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 39159334-39161333 Glycine max
Glyma.12G231600 5.0kb upstream 5.0kb upstream 7123 true Chr12: 39152211-39159333 Glycine max
Glyma.12G231600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 39152211-39157210 Glycine max
Glyma.12G231600 5.0kb downstream 5.0kb downstream 7123 true Chr12: 39157211-39164333 Glycine max
Glyma.12G231600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 39159334-39164333 Glycine max
Glyma.12G231600 10.0kb upstream 10.0kb upstream 12123 true Chr12: 39147211-39159333 Glycine max
Glyma.12G231600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 39147211-39157210 Glycine max
Glyma.12G231600 10.0kb downstream 10.0kb downstream 12123 true Chr12: 39157211-39169333 Glycine max
Glyma.12G231600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 39159334-39169333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309155 5265 Fabidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021573 0.0 0.0975645 Low Low
cufflinks 0.431755 0.0 1.64742   High
cufflinks 0.130232 0.0 0.52029 Low  
cufflinks 0.159376 0.0 0.632459 Low  
cufflinks 0.091941 0.0 0.373497 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.265903 0.0 1.03707    
cufflinks 0.188079 0.0 0.742166 Low  
cufflinks 0.211996 0.0 0.833177 Low  
cufflinks 0.097     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.145       High
cufflinks 0.023     Low  
cufflinks 0.063     Low  
cufflinks 0.01     Low Low
cufflinks 0.08     Low  
cufflinks 0.027     Low  
cufflinks 0.493       High
cufflinks 0.07     Low  
cufflinks 0.017     Low Low
cufflinks 0.01     Low Low
cufflinks 0.067     Low  
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain