Gene : Glyma.12G223000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11089:SF9 - NUCLEOLAR GTP-BINDING PROTEIN 2 Genomic Order:  2230
Name:  ? Glyma.12G223000 Secondary Identifier:  ? PAC:30546220
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G223000 0.5kb upstream 0.5kb upstream 6033 true Chr12: 38277752-38283784 Glycine max
Glyma.12G223000 0.5kb upstream 0.5kb upstream 500 false Chr12: 38277752-38278251 Glycine max
Glyma.12G223000 0.5kb downstream 0.5kb downstream 6033 true Chr12: 38278252-38284284 Glycine max
Glyma.12G223000 0.5kb downstream 0.5kb downstream 500 false Chr12: 38283785-38284284 Glycine max
Glyma.12G223000 1.0kb upstream 1.0kb upstream 6533 true Chr12: 38277252-38283784 Glycine max
Glyma.12G223000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38277252-38278251 Glycine max
Glyma.12G223000 1.0kb downstream 1.0kb downstream 6533 true Chr12: 38278252-38284784 Glycine max
Glyma.12G223000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38283785-38284784 Glycine max
Glyma.12G223000 2.0kb upstream 2.0kb upstream 7533 true Chr12: 38276252-38283784 Glycine max
Glyma.12G223000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38276252-38278251 Glycine max
Glyma.12G223000 2.0kb downstream 2.0kb downstream 7533 true Chr12: 38278252-38285784 Glycine max
Glyma.12G223000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38283785-38285784 Glycine max
Glyma.12G223000 5.0kb upstream 5.0kb upstream 10533 true Chr12: 38273252-38283784 Glycine max
Glyma.12G223000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38273252-38278251 Glycine max
Glyma.12G223000 5.0kb downstream 5.0kb downstream 10533 true Chr12: 38278252-38288784 Glycine max
Glyma.12G223000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38283785-38288784 Glycine max
Glyma.12G223000 10.0kb upstream 10.0kb upstream 15533 true Chr12: 38268252-38283784 Glycine max
Glyma.12G223000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38268252-38278251 Glycine max
Glyma.12G223000 10.0kb downstream 10.0kb downstream 15533 true Chr12: 38278252-38293784 Glycine max
Glyma.12G223000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38283785-38293784 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040874 5273 Angiosperm View MSA
122299235 5265 Fabidae View MSA
124066525 5270 Rosid View MSA
123744991 5271 Pentapetalae View MSA
122793038 5272 Eudicot View MSA
121344616 5274 Embryophyte View MSA
123427861 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7322 0.0 72.8106    
cufflinks 18.9989 0.0 73.2144   High
cufflinks 13.9679 0.0 41.257    
cufflinks 14.9524 0.0 58.8904    
cufflinks 17.3061 0.0 67.1564    
cufflinks 12.0796 0.0 46.0599   Low
cufflinks 18.5834 0.0 55.5874    
cufflinks 17.4143 0.0 67.1608    
cufflinks 14.271 0.0 55.7738    
cufflinks 3.469        
cufflinks 1.998       Low
cufflinks 3.661        
cufflinks 4.141        
cufflinks 4.742       High
cufflinks 3.308        
cufflinks 4.598        
cufflinks 2.344       Low
cufflinks 4.057        
cufflinks 5.23       High
cufflinks 3.757        
cufflinks 2.585       Low
cufflinks 3.736        
cufflinks 4.732       High
cufflinks 1.96       Low
cufflinks 3.991        
cufflinks 3.186        

0 Strain