Gene : Glyma.12G223100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31942:SF15 - MLO-LIKE PROTEIN 11-RELATED Genomic Order:  2231
Name:  ? Glyma.12G223100 Secondary Identifier:  ? PAC:30547484
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G223100 0.5kb upstream 0.5kb upstream 8456 true Chr12: 38285374-38293829 Glycine max
Glyma.12G223100 0.5kb upstream 0.5kb upstream 500 false Chr12: 38285374-38285873 Glycine max
Glyma.12G223100 0.5kb downstream 0.5kb downstream 8456 true Chr12: 38285874-38294329 Glycine max
Glyma.12G223100 0.5kb downstream 0.5kb downstream 500 false Chr12: 38293830-38294329 Glycine max
Glyma.12G223100 1.0kb upstream 1.0kb upstream 8956 true Chr12: 38284874-38293829 Glycine max
Glyma.12G223100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38284874-38285873 Glycine max
Glyma.12G223100 1.0kb downstream 1.0kb downstream 8956 true Chr12: 38285874-38294829 Glycine max
Glyma.12G223100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38293830-38294829 Glycine max
Glyma.12G223100 2.0kb upstream 2.0kb upstream 9956 true Chr12: 38283874-38293829 Glycine max
Glyma.12G223100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38283874-38285873 Glycine max
Glyma.12G223100 2.0kb downstream 2.0kb downstream 9956 true Chr12: 38285874-38295829 Glycine max
Glyma.12G223100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38293830-38295829 Glycine max
Glyma.12G223100 5.0kb upstream 5.0kb upstream 12956 true Chr12: 38280874-38293829 Glycine max
Glyma.12G223100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38280874-38285873 Glycine max
Glyma.12G223100 5.0kb downstream 5.0kb downstream 12956 true Chr12: 38285874-38298829 Glycine max
Glyma.12G223100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38293830-38298829 Glycine max
Glyma.12G223100 10.0kb upstream 10.0kb upstream 17956 true Chr12: 38275874-38293829 Glycine max
Glyma.12G223100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38275874-38285873 Glycine max
Glyma.12G223100 10.0kb downstream 10.0kb downstream 17956 true Chr12: 38285874-38303829 Glycine max
Glyma.12G223100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38293830-38303829 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302883 5265 Fabidae View MSA
124061204 5270 Rosid View MSA
123749822 5271 Pentapetalae View MSA
122795258 5272 Eudicot View MSA
122048156 5273 Angiosperm View MSA
121351201 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23536 0.0 5.02    
cufflinks 1.4304 0.0 7.03763   High
cufflinks 1.38509 0.0 6.75155   High
cufflinks 0.505601 0.0 2.99244   Low
cufflinks 0.679497 0.0 4.04383    
cufflinks 0.592705 0.0 3.47647    
cufflinks 0.42433 0.0 2.60922   Low
cufflinks 0.959996 0.0 5.25737    
cufflinks 0.905879 0.0 4.91545    
cufflinks 0.127        
cufflinks 0.025     Low Low
cufflinks 0.288       High
cufflinks 0.18        
cufflinks 0.353       High
cufflinks 0.039     Low Low
cufflinks 0.099     Low  
cufflinks 0.046     Low  
cufflinks 0.32       High
cufflinks 0.291       High
cufflinks 0.057     Low  
cufflinks 0.05     Low  
cufflinks 0.08     Low  
cufflinks 0.057     Low  
cufflinks 0.035     Low Low
cufflinks 0.065     Low  
cufflinks 0.081        

0 Strain