Gene : Glyma.12G223200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Genomic Order:  2232
Name:  ? Glyma.12G223200 Secondary Identifier:  ? PAC:30546679
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G223200 0.5kb upstream 0.5kb upstream 8931 true Chr12: 38297539-38306469 Glycine max
Glyma.12G223200 0.5kb upstream 0.5kb upstream 500 false Chr12: 38305970-38306469 Glycine max
Glyma.12G223200 0.5kb downstream 0.5kb downstream 8931 true Chr12: 38297039-38305969 Glycine max
Glyma.12G223200 0.5kb downstream 0.5kb downstream 500 false Chr12: 38297039-38297538 Glycine max
Glyma.12G223200 1.0kb upstream 1.0kb upstream 9431 true Chr12: 38297539-38306969 Glycine max
Glyma.12G223200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38305970-38306969 Glycine max
Glyma.12G223200 1.0kb downstream 1.0kb downstream 9431 true Chr12: 38296539-38305969 Glycine max
Glyma.12G223200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38296539-38297538 Glycine max
Glyma.12G223200 2.0kb upstream 2.0kb upstream 10431 true Chr12: 38297539-38307969 Glycine max
Glyma.12G223200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38305970-38307969 Glycine max
Glyma.12G223200 2.0kb downstream 2.0kb downstream 10431 true Chr12: 38295539-38305969 Glycine max
Glyma.12G223200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38295539-38297538 Glycine max
Glyma.12G223200 5.0kb upstream 5.0kb upstream 13431 true Chr12: 38297539-38310969 Glycine max
Glyma.12G223200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38305970-38310969 Glycine max
Glyma.12G223200 5.0kb downstream 5.0kb downstream 13431 true Chr12: 38292539-38305969 Glycine max
Glyma.12G223200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38292539-38297538 Glycine max
Glyma.12G223200 10.0kb upstream 10.0kb upstream 18431 true Chr12: 38297539-38315969 Glycine max
Glyma.12G223200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38305970-38315969 Glycine max
Glyma.12G223200 10.0kb downstream 10.0kb downstream 18431 true Chr12: 38287539-38305969 Glycine max
Glyma.12G223200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38287539-38297538 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297015 5265 Fabidae View MSA
124068614 5270 Rosid View MSA
123746416 5271 Pentapetalae View MSA
122790584 5272 Eudicot View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17211 0.0 6.80947   Low
cufflinks 6.92887 0.0 18.9172    
cufflinks 4.09301 0.0 11.6931    
cufflinks 8.06005 0.0 21.8124    
cufflinks 4.13854 0.0 11.9008    
cufflinks 1.28575 0.0 4.31889   Low
cufflinks 10.9158 0.0 29.222   High
cufflinks 3.53936 0.0 10.3295    
cufflinks 4.23415 0.0 12.0897    
cufflinks 0.974        
cufflinks 0.598       Low
cufflinks 1.935        
cufflinks 0.981        
cufflinks 1.184        
cufflinks 0.556       Low
cufflinks 1.916        
cufflinks 0.577       Low
cufflinks 2.559       High
cufflinks 2.755       High
cufflinks 2.275       High
cufflinks 0.668        
cufflinks 1.98        
cufflinks 1.97        
cufflinks 0.519       Low
cufflinks 1.918        
cufflinks 0.411       Low

0 Strain