Gene : Glyma.12G227200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  2272
Name:  ? Glyma.12G227200 Secondary Identifier:  ? PAC:30545922
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G227200 0.5kb upstream 0.5kb upstream 4710 true Chr12: 38705025-38709734 Glycine max
Glyma.12G227200 0.5kb upstream 0.5kb upstream 500 false Chr12: 38705025-38705524 Glycine max
Glyma.12G227200 0.5kb downstream 0.5kb downstream 4710 true Chr12: 38705525-38710234 Glycine max
Glyma.12G227200 0.5kb downstream 0.5kb downstream 500 false Chr12: 38709735-38710234 Glycine max
Glyma.12G227200 1.0kb upstream 1.0kb upstream 5210 true Chr12: 38704525-38709734 Glycine max
Glyma.12G227200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38704525-38705524 Glycine max
Glyma.12G227200 1.0kb downstream 1.0kb downstream 5210 true Chr12: 38705525-38710734 Glycine max
Glyma.12G227200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38709735-38710734 Glycine max
Glyma.12G227200 2.0kb upstream 2.0kb upstream 6210 true Chr12: 38703525-38709734 Glycine max
Glyma.12G227200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38703525-38705524 Glycine max
Glyma.12G227200 2.0kb downstream 2.0kb downstream 6210 true Chr12: 38705525-38711734 Glycine max
Glyma.12G227200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38709735-38711734 Glycine max
Glyma.12G227200 5.0kb upstream 5.0kb upstream 9210 true Chr12: 38700525-38709734 Glycine max
Glyma.12G227200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38700525-38705524 Glycine max
Glyma.12G227200 5.0kb downstream 5.0kb downstream 9210 true Chr12: 38705525-38714734 Glycine max
Glyma.12G227200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38709735-38714734 Glycine max
Glyma.12G227200 10.0kb upstream 10.0kb upstream 14210 true Chr12: 38695525-38709734 Glycine max
Glyma.12G227200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38695525-38705524 Glycine max
Glyma.12G227200 10.0kb downstream 10.0kb downstream 14210 true Chr12: 38705525-38719734 Glycine max
Glyma.12G227200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38709735-38719734 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305734 5265 Fabidae View MSA
124063883 5270 Rosid View MSA
123739511 5271 Pentapetalae View MSA
122786347 5272 Eudicot View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8196 0.0 61.6246   High
cufflinks 9.1212 0.0 34.8345    
cufflinks 4.28169 0.0 21.3999    
cufflinks 8.46806 0.0 33.1555    
cufflinks 2.42067 0.0 14.5901    
cufflinks 0.954106 0.0 6.5499   Low
cufflinks 3.14206 0.0 14.7982    
cufflinks 6.65399 0.0 27.2189    
cufflinks 1.93236 0.0 12.1244    
cufflinks 0.345        
cufflinks 0.023     Low Low
cufflinks 0.491        
cufflinks 0.088     Low  
cufflinks 0.072     Low  
cufflinks 0.036     Low  
cufflinks 1.291       High
cufflinks 0.053     Low  
cufflinks 0.519        
cufflinks 0.513        
cufflinks 1.5       High
cufflinks 0.011     Low Low
cufflinks 1.285       High
cufflinks 1.457       High
cufflinks 0.011     Low Low
cufflinks 1.217       High
cufflinks 0.032     Low  

0 Strain