Gene : Glyma.12G212200 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  2122
Name:  ? Glyma.12G212200 Secondary Identifier:  ? PAC:30548323
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G212200 0.5kb upstream 0.5kb upstream 1797 true Chr12: 37121006-37122802 Glycine max
Glyma.12G212200 0.5kb upstream 0.5kb upstream 500 false Chr12: 37122303-37122802 Glycine max
Glyma.12G212200 0.5kb downstream 0.5kb downstream 1797 true Chr12: 37120506-37122302 Glycine max
Glyma.12G212200 0.5kb downstream 0.5kb downstream 500 false Chr12: 37120506-37121005 Glycine max
Glyma.12G212200 1.0kb upstream 1.0kb upstream 2297 true Chr12: 37121006-37123302 Glycine max
Glyma.12G212200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37122303-37123302 Glycine max
Glyma.12G212200 1.0kb downstream 1.0kb downstream 2297 true Chr12: 37120006-37122302 Glycine max
Glyma.12G212200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37120006-37121005 Glycine max
Glyma.12G212200 2.0kb upstream 2.0kb upstream 3297 true Chr12: 37121006-37124302 Glycine max
Glyma.12G212200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37122303-37124302 Glycine max
Glyma.12G212200 2.0kb downstream 2.0kb downstream 3297 true Chr12: 37119006-37122302 Glycine max
Glyma.12G212200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37119006-37121005 Glycine max
Glyma.12G212200 5.0kb upstream 5.0kb upstream 6297 true Chr12: 37121006-37127302 Glycine max
Glyma.12G212200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37122303-37127302 Glycine max
Glyma.12G212200 5.0kb downstream 5.0kb downstream 6297 true Chr12: 37116006-37122302 Glycine max
Glyma.12G212200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37116006-37121005 Glycine max
Glyma.12G212200 10.0kb upstream 10.0kb upstream 11297 true Chr12: 37121006-37132302 Glycine max
Glyma.12G212200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37122303-37132302 Glycine max
Glyma.12G212200 10.0kb downstream 10.0kb downstream 11297 true Chr12: 37111006-37122302 Glycine max
Glyma.12G212200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37111006-37121005 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297715 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.87114 0.0 3.15821    
cufflinks 1.2856 0.0 4.52867    
cufflinks 0.49402 0.0 1.84161    
cufflinks 0.153725 0.0 0.603404 Low Low
cufflinks 1.8361 0.0 6.2796    
cufflinks 6.62091 0.0 19.0362   High
cufflinks 0.134861 0.0 0.532539 Low Low
cufflinks 1.38558 0.0 4.8414    
cufflinks 3.47435 0.0 10.8868    
cufflinks 3.522       High
cufflinks 0.619        
cufflinks 0.435       Low
cufflinks 2.416        
cufflinks 0.776        
cufflinks 0.072       Low
cufflinks 1.283        
cufflinks 1.4        
cufflinks 0.539        
cufflinks 1.591        
cufflinks 1.243        
cufflinks 1.466        
cufflinks 1.379        
cufflinks 2.044        
cufflinks 1.734        
cufflinks 1.388        
cufflinks 1.517        

0 Strain