Gene : Glyma.12G218800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF06764 - Protein of unknown function (DUF1223) (DUF1223) Genomic Order:  2188
Name:  ? Glyma.12G218800 Secondary Identifier:  ? PAC:30546177
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G218800 0.5kb upstream 0.5kb upstream 4204 true Chr12: 37833635-37837838 Glycine max
Glyma.12G218800 0.5kb upstream 0.5kb upstream 500 false Chr12: 37837339-37837838 Glycine max
Glyma.12G218800 0.5kb downstream 0.5kb downstream 4204 true Chr12: 37833135-37837338 Glycine max
Glyma.12G218800 0.5kb downstream 0.5kb downstream 500 false Chr12: 37833135-37833634 Glycine max
Glyma.12G218800 1.0kb upstream 1.0kb upstream 4704 true Chr12: 37833635-37838338 Glycine max
Glyma.12G218800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37837339-37838338 Glycine max
Glyma.12G218800 1.0kb downstream 1.0kb downstream 4704 true Chr12: 37832635-37837338 Glycine max
Glyma.12G218800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37832635-37833634 Glycine max
Glyma.12G218800 2.0kb upstream 2.0kb upstream 5704 true Chr12: 37833635-37839338 Glycine max
Glyma.12G218800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37837339-37839338 Glycine max
Glyma.12G218800 2.0kb downstream 2.0kb downstream 5704 true Chr12: 37831635-37837338 Glycine max
Glyma.12G218800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37831635-37833634 Glycine max
Glyma.12G218800 5.0kb upstream 5.0kb upstream 8704 true Chr12: 37833635-37842338 Glycine max
Glyma.12G218800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37837339-37842338 Glycine max
Glyma.12G218800 5.0kb downstream 5.0kb downstream 8704 true Chr12: 37828635-37837338 Glycine max
Glyma.12G218800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37828635-37833634 Glycine max
Glyma.12G218800 10.0kb upstream 10.0kb upstream 13704 true Chr12: 37833635-37847338 Glycine max
Glyma.12G218800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37837339-37847338 Glycine max
Glyma.12G218800 10.0kb downstream 10.0kb downstream 13704 true Chr12: 37823635-37837338 Glycine max
Glyma.12G218800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37823635-37833634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244834 5265 Fabidae Singleton cluster - no MSA
123989077 5270 Rosid Singleton cluster - no MSA
123564213 5271 Pentapetalae Singleton cluster - no MSA
122598983 5272 Eudicot Singleton cluster - no MSA
122044581 5273 Angiosperm View MSA
121347428 5274 Embryophyte View MSA
123380547 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015346 0.0 0.0694025 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.77976 0.0 27.0598   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0131214 0.0 0.0600987 Low  
cufflinks 0.0461526 0.0 0.191129 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.51        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.508        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain