Gene : Glyma.12G219600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21500 - TUBULIN-SPECIFIC CHAPERONE A Genomic Order:  2196
Name:  ? Glyma.12G219600 Secondary Identifier:  ? PAC:30547965
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G219600 0.5kb upstream 0.5kb upstream 2615 true Chr12: 37920908-37923522 Glycine max
Glyma.12G219600 0.5kb upstream 0.5kb upstream 500 false Chr12: 37920908-37921407 Glycine max
Glyma.12G219600 0.5kb downstream 0.5kb downstream 2615 true Chr12: 37921408-37924022 Glycine max
Glyma.12G219600 0.5kb downstream 0.5kb downstream 500 false Chr12: 37923523-37924022 Glycine max
Glyma.12G219600 1.0kb upstream 1.0kb upstream 3115 true Chr12: 37920408-37923522 Glycine max
Glyma.12G219600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37920408-37921407 Glycine max
Glyma.12G219600 1.0kb downstream 1.0kb downstream 3115 true Chr12: 37921408-37924522 Glycine max
Glyma.12G219600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37923523-37924522 Glycine max
Glyma.12G219600 2.0kb upstream 2.0kb upstream 4115 true Chr12: 37919408-37923522 Glycine max
Glyma.12G219600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37919408-37921407 Glycine max
Glyma.12G219600 2.0kb downstream 2.0kb downstream 4115 true Chr12: 37921408-37925522 Glycine max
Glyma.12G219600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37923523-37925522 Glycine max
Glyma.12G219600 5.0kb upstream 5.0kb upstream 7115 true Chr12: 37916408-37923522 Glycine max
Glyma.12G219600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37916408-37921407 Glycine max
Glyma.12G219600 5.0kb downstream 5.0kb downstream 7115 true Chr12: 37921408-37928522 Glycine max
Glyma.12G219600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37923523-37928522 Glycine max
Glyma.12G219600 10.0kb upstream 10.0kb upstream 12115 true Chr12: 37911408-37923522 Glycine max
Glyma.12G219600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37911408-37921407 Glycine max
Glyma.12G219600 10.0kb downstream 10.0kb downstream 12115 true Chr12: 37921408-37933522 Glycine max
Glyma.12G219600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37923523-37933522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301088 5265 Fabidae View MSA
124063912 5270 Rosid View MSA
123749195 5271 Pentapetalae View MSA
122790493 5272 Eudicot View MSA
122044127 5273 Angiosperm View MSA
121349441 5274 Embryophyte View MSA
123428013 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7665 0.0 38.3439   Low
cufflinks 26.3083 0.0 70.4536 High  
cufflinks 12.1765 0.0 34.224   Low
cufflinks 20.7115 0.0 55.9559 High  
cufflinks 26.866 0.0 71.8939 High  
cufflinks 26.9439 0.0 72.1302 High  
cufflinks 31.388 0.0 83.7963 High High
cufflinks 22.9624 0.0 61.7634 High  
cufflinks 25.4983 0.0 68.3478 High  
cufflinks 13.274     High  
cufflinks 3.984       Low
cufflinks 11.155     High  
cufflinks 18.594     High High
cufflinks 25.983     High High
cufflinks 5.334     High Low
cufflinks 15.373     High  
cufflinks 5.989       Low
cufflinks 14.279     High  
cufflinks 13.963     High  
cufflinks 11.475     High  
cufflinks 6.929     High  
cufflinks 12.312     High  
cufflinks 12.482     High  
cufflinks 4.807       Low
cufflinks 15.959     High  
cufflinks 8.351     High  

0 Strain