Gene : Glyma.12G220000 G. max Wm82.a2.v1
Genomic Order:  2200 Name:  ? Glyma.12G220000
Secondary Identifier:  ? PAC:30545567
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G220000 0.5kb upstream 0.5kb upstream 5077 true Chr12: 37945572-37950648 Glycine max
Glyma.12G220000 0.5kb upstream 0.5kb upstream 500 false Chr12: 37945572-37946071 Glycine max
Glyma.12G220000 0.5kb downstream 0.5kb downstream 5077 true Chr12: 37946072-37951148 Glycine max
Glyma.12G220000 0.5kb downstream 0.5kb downstream 500 false Chr12: 37950649-37951148 Glycine max
Glyma.12G220000 1.0kb upstream 1.0kb upstream 5577 true Chr12: 37945072-37950648 Glycine max
Glyma.12G220000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 37945072-37946071 Glycine max
Glyma.12G220000 1.0kb downstream 1.0kb downstream 5577 true Chr12: 37946072-37951648 Glycine max
Glyma.12G220000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 37950649-37951648 Glycine max
Glyma.12G220000 2.0kb upstream 2.0kb upstream 6577 true Chr12: 37944072-37950648 Glycine max
Glyma.12G220000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 37944072-37946071 Glycine max
Glyma.12G220000 2.0kb downstream 2.0kb downstream 6577 true Chr12: 37946072-37952648 Glycine max
Glyma.12G220000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 37950649-37952648 Glycine max
Glyma.12G220000 5.0kb upstream 5.0kb upstream 9577 true Chr12: 37941072-37950648 Glycine max
Glyma.12G220000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 37941072-37946071 Glycine max
Glyma.12G220000 5.0kb downstream 5.0kb downstream 9577 true Chr12: 37946072-37955648 Glycine max
Glyma.12G220000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 37950649-37955648 Glycine max
Glyma.12G220000 10.0kb upstream 10.0kb upstream 14577 true Chr12: 37936072-37950648 Glycine max
Glyma.12G220000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 37936072-37946071 Glycine max
Glyma.12G220000 10.0kb downstream 10.0kb downstream 14577 true Chr12: 37946072-37960648 Glycine max
Glyma.12G220000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 37950649-37960648 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026569 5273 Angiosperm View MSA
122305209 5265 Fabidae View MSA
124068648 5270 Rosid View MSA
123737361 5271 Pentapetalae View MSA
122787505 5272 Eudicot View MSA
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7531 0.0 93.0757 High High
cufflinks 10.9522 0.0 30.3541    
cufflinks 8.99159 0.0 25.3102    
cufflinks 4.06286 0.0 12.7319    
cufflinks 2.33528 0.0 7.91918    
cufflinks 0.942348 0.0 3.43494   Low
cufflinks 8.04789 0.0 23.044    
cufflinks 3.82654 0.0 12.0792    
cufflinks 2.94334 0.0 9.65426    
cufflinks 1.212        
cufflinks 2.302        
cufflinks 4.251        
cufflinks 0.549       Low
cufflinks 1.017        
cufflinks 3.811        
cufflinks 9.438     High High
cufflinks 0.328       Low
cufflinks 3.12        
cufflinks 4.11        
cufflinks 14.648     High High
cufflinks 1.744        
cufflinks 11.568     High High
cufflinks 6.345        
cufflinks 1.596        
cufflinks 13.513     High High
cufflinks 0.54       Low

0 Strain