Gene : Glyma.12G205700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14493:SF53 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  2057
Name:  ? Glyma.12G205700 Secondary Identifier:  ? PAC:30546963
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G205700 0.5kb upstream 0.5kb upstream 2100 true Chr12: 36599468-36601567 Glycine max
Glyma.12G205700 0.5kb upstream 0.5kb upstream 500 false Chr12: 36599468-36599967 Glycine max
Glyma.12G205700 0.5kb downstream 0.5kb downstream 2100 true Chr12: 36599968-36602067 Glycine max
Glyma.12G205700 0.5kb downstream 0.5kb downstream 500 false Chr12: 36601568-36602067 Glycine max
Glyma.12G205700 1.0kb upstream 1.0kb upstream 2600 true Chr12: 36598968-36601567 Glycine max
Glyma.12G205700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36598968-36599967 Glycine max
Glyma.12G205700 1.0kb downstream 1.0kb downstream 2600 true Chr12: 36599968-36602567 Glycine max
Glyma.12G205700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36601568-36602567 Glycine max
Glyma.12G205700 2.0kb upstream 2.0kb upstream 3600 true Chr12: 36597968-36601567 Glycine max
Glyma.12G205700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36597968-36599967 Glycine max
Glyma.12G205700 2.0kb downstream 2.0kb downstream 3600 true Chr12: 36599968-36603567 Glycine max
Glyma.12G205700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36601568-36603567 Glycine max
Glyma.12G205700 5.0kb upstream 5.0kb upstream 6600 true Chr12: 36594968-36601567 Glycine max
Glyma.12G205700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36594968-36599967 Glycine max
Glyma.12G205700 5.0kb downstream 5.0kb downstream 6600 true Chr12: 36599968-36606567 Glycine max
Glyma.12G205700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36601568-36606567 Glycine max
Glyma.12G205700 10.0kb upstream 10.0kb upstream 11600 true Chr12: 36589968-36601567 Glycine max
Glyma.12G205700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36589968-36599967 Glycine max
Glyma.12G205700 10.0kb downstream 10.0kb downstream 11600 true Chr12: 36599968-36611567 Glycine max
Glyma.12G205700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36601568-36611567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307083 5265 Fabidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.439435 0.0 1.65084   Low
cufflinks 1.34374 0.0 4.72488    
cufflinks 2.75315 0.0 9.00633    
cufflinks 6.23794 0.0 18.0551    
cufflinks 3.20229 0.0 10.0879    
cufflinks 1.92114 0.0 6.51827    
cufflinks 140.336 0.0 452.633 High High
cufflinks 0.976597 0.0 3.50869    
cufflinks 0.804309 0.0 2.92583    
cufflinks 5.953       High
cufflinks 3.091        
cufflinks 0.668        
cufflinks 1.261        
cufflinks 0.532       Low
cufflinks 1.594        
cufflinks 1.944        
cufflinks 12.856     High High
cufflinks 0.265       Low
cufflinks 0.875        
cufflinks 0.797        
cufflinks 3.422        
cufflinks 0.808        
cufflinks 1.202        
cufflinks 2.71        
cufflinks 1.238        
cufflinks 8.369     High High

0 Strain