Gene : Glyma.12G208800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  2088
Name:  ? Glyma.12G208800 Secondary Identifier:  ? PAC:30548657
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G208800 0.5kb upstream 0.5kb upstream 3903 true Chr12: 36808660-36812562 Glycine max
Glyma.12G208800 0.5kb upstream 0.5kb upstream 500 false Chr12: 36812063-36812562 Glycine max
Glyma.12G208800 0.5kb downstream 0.5kb downstream 3903 true Chr12: 36808160-36812062 Glycine max
Glyma.12G208800 0.5kb downstream 0.5kb downstream 500 false Chr12: 36808160-36808659 Glycine max
Glyma.12G208800 1.0kb upstream 1.0kb upstream 4403 true Chr12: 36808660-36813062 Glycine max
Glyma.12G208800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36812063-36813062 Glycine max
Glyma.12G208800 1.0kb downstream 1.0kb downstream 4403 true Chr12: 36807660-36812062 Glycine max
Glyma.12G208800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36807660-36808659 Glycine max
Glyma.12G208800 2.0kb upstream 2.0kb upstream 5403 true Chr12: 36808660-36814062 Glycine max
Glyma.12G208800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36812063-36814062 Glycine max
Glyma.12G208800 2.0kb downstream 2.0kb downstream 5403 true Chr12: 36806660-36812062 Glycine max
Glyma.12G208800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36806660-36808659 Glycine max
Glyma.12G208800 5.0kb upstream 5.0kb upstream 8403 true Chr12: 36808660-36817062 Glycine max
Glyma.12G208800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36812063-36817062 Glycine max
Glyma.12G208800 5.0kb downstream 5.0kb downstream 8403 true Chr12: 36803660-36812062 Glycine max
Glyma.12G208800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36803660-36808659 Glycine max
Glyma.12G208800 10.0kb upstream 10.0kb upstream 13403 true Chr12: 36808660-36822062 Glycine max
Glyma.12G208800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36812063-36822062 Glycine max
Glyma.12G208800 10.0kb downstream 10.0kb downstream 13403 true Chr12: 36798660-36812062 Glycine max
Glyma.12G208800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36798660-36808659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304402 5265 Fabidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7807 0.0 31.4298   High
cufflinks 4.46459 0.0 12.4613    
cufflinks 2.75328 0.0 8.10058    
cufflinks 14.4984 0.0 38.8041   High
cufflinks 0.498931 0.0 1.79717   Low
cufflinks 0.918444 0.0 3.14575    
cufflinks 1.89351 0.0 5.89158    
cufflinks 2.11352 0.0 6.45002    
cufflinks 1.49652 0.0 4.81409    
cufflinks 0.758       Low
cufflinks 1.552        
cufflinks 3.911        
cufflinks 0.948       Low
cufflinks 1.048        
cufflinks 0.747       Low
cufflinks 5.561       High
cufflinks 0.601       Low
cufflinks 5.636       High
cufflinks 4.558        
cufflinks 4.65        
cufflinks 1.735        
cufflinks 6.267       High
cufflinks 4.048        
cufflinks 2.934        
cufflinks 3.546        
cufflinks 1.153        

0 Strain