Gene : Glyma.12G210000 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  2100
Name:  ? Glyma.12G210000 Secondary Identifier:  ? PAC:30548287
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax VALSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G210000 0.5kb upstream 0.5kb upstream 4516 true Chr12: 36914779-36919294 Glycine max
Glyma.12G210000 0.5kb upstream 0.5kb upstream 500 false Chr12: 36914779-36915278 Glycine max
Glyma.12G210000 0.5kb downstream 0.5kb downstream 4516 true Chr12: 36915279-36919794 Glycine max
Glyma.12G210000 0.5kb downstream 0.5kb downstream 500 false Chr12: 36919295-36919794 Glycine max
Glyma.12G210000 1.0kb upstream 1.0kb upstream 5016 true Chr12: 36914279-36919294 Glycine max
Glyma.12G210000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36914279-36915278 Glycine max
Glyma.12G210000 1.0kb downstream 1.0kb downstream 5016 true Chr12: 36915279-36920294 Glycine max
Glyma.12G210000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36919295-36920294 Glycine max
Glyma.12G210000 2.0kb upstream 2.0kb upstream 6016 true Chr12: 36913279-36919294 Glycine max
Glyma.12G210000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36913279-36915278 Glycine max
Glyma.12G210000 2.0kb downstream 2.0kb downstream 6016 true Chr12: 36915279-36921294 Glycine max
Glyma.12G210000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36919295-36921294 Glycine max
Glyma.12G210000 5.0kb upstream 5.0kb upstream 9016 true Chr12: 36910279-36919294 Glycine max
Glyma.12G210000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36910279-36915278 Glycine max
Glyma.12G210000 5.0kb downstream 5.0kb downstream 9016 true Chr12: 36915279-36924294 Glycine max
Glyma.12G210000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36919295-36924294 Glycine max
Glyma.12G210000 10.0kb upstream 10.0kb upstream 14016 true Chr12: 36905279-36919294 Glycine max
Glyma.12G210000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36905279-36915278 Glycine max
Glyma.12G210000 10.0kb downstream 10.0kb downstream 14016 true Chr12: 36915279-36929294 Glycine max
Glyma.12G210000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36919295-36929294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299493 5265 Fabidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.2145 0.0 101.739 High  
cufflinks 87.3356 0.0 279.922 High  
cufflinks 40.1242 0.0 114.126 High  
cufflinks 128.176 0.0 447.311 High  
cufflinks 80.0961 0.0 253.481 High  
cufflinks 25.4489 0.0 69.3794 High Low
cufflinks 321.657 0.0 1494.75 High High
cufflinks 66.4027 0.0 202.839 High  
cufflinks 71.8533 0.0 222.776 High  
cufflinks 30.434     High  
cufflinks 4.971       Low
cufflinks 31.178     High  
cufflinks 31.879     High  
cufflinks 40.731     High  
cufflinks 17.905     High  
cufflinks 26.113     High  
cufflinks 20.908     High  
cufflinks 42.066     High High
cufflinks 45.449     High High
cufflinks 24.507     High  
cufflinks 8.085     High Low
cufflinks 25.251     High  
cufflinks 30.723     High  
cufflinks 6.585     High Low
cufflinks 24.288     High  
cufflinks 11.678     High  

0 Strain