Gene : Glyma.13G009800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  98
Name:  ? Glyma.13G009800 Secondary Identifier:  ? PAC:30503189
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G009800 0.5kb upstream 0.5kb upstream 4688 true Chr13: 2654852-2659539 Glycine max
Glyma.13G009800 0.5kb upstream 0.5kb upstream 500 false Chr13: 2654852-2655351 Glycine max
Glyma.13G009800 0.5kb downstream 0.5kb downstream 4688 true Chr13: 2655352-2660039 Glycine max
Glyma.13G009800 0.5kb downstream 0.5kb downstream 500 false Chr13: 2659540-2660039 Glycine max
Glyma.13G009800 1.0kb upstream 1.0kb upstream 5188 true Chr13: 2654352-2659539 Glycine max
Glyma.13G009800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2654352-2655351 Glycine max
Glyma.13G009800 1.0kb downstream 1.0kb downstream 5188 true Chr13: 2655352-2660539 Glycine max
Glyma.13G009800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2659540-2660539 Glycine max
Glyma.13G009800 2.0kb upstream 2.0kb upstream 6188 true Chr13: 2653352-2659539 Glycine max
Glyma.13G009800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2653352-2655351 Glycine max
Glyma.13G009800 2.0kb downstream 2.0kb downstream 6188 true Chr13: 2655352-2661539 Glycine max
Glyma.13G009800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2659540-2661539 Glycine max
Glyma.13G009800 5.0kb upstream 5.0kb upstream 9188 true Chr13: 2650352-2659539 Glycine max
Glyma.13G009800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2650352-2655351 Glycine max
Glyma.13G009800 5.0kb downstream 5.0kb downstream 9188 true Chr13: 2655352-2664539 Glycine max
Glyma.13G009800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2659540-2664539 Glycine max
Glyma.13G009800 10.0kb upstream 10.0kb upstream 14188 true Chr13: 2645352-2659539 Glycine max
Glyma.13G009800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2645352-2655351 Glycine max
Glyma.13G009800 10.0kb downstream 10.0kb downstream 14188 true Chr13: 2655352-2669539 Glycine max
Glyma.13G009800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2659540-2669539 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312537 5265 Fabidae View MSA
124068124 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5017 0.0 49.8682    
cufflinks 20.4615 0.0 55.4653 High High
cufflinks 18.7881 0.0 50.7503   High
cufflinks 13.1272 0.0 35.0415    
cufflinks 14.213 0.0 37.9773    
cufflinks 11.7886 0.0 31.4505   Low
cufflinks 15.1294 0.0 40.4758    
cufflinks 15.9256 0.0 42.6727    
cufflinks 10.7756 0.0 28.7603   Low
cufflinks 8.32     High  
cufflinks 9.521     High  
cufflinks 12.011     High  
cufflinks 8.938     High  
cufflinks 11.696     High  
cufflinks 7.36     High Low
cufflinks 11.775     High  
cufflinks 5.729       Low
cufflinks 9.818     High  
cufflinks 17.582     High High
cufflinks 12.376     High  
cufflinks 8.158     High  
cufflinks 13.355     High High
cufflinks 12.253     High  
cufflinks 8.656     High  
cufflinks 10.865     High  
cufflinks 10.39     High  

0 Strain