Gene : Glyma.13G000500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31852:SF43 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  5
Name:  ? Glyma.13G000500 Secondary Identifier:  ? PAC:30503997
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G000500 0.5kb upstream 0.5kb upstream 1459 true Chr13: 153946-155404 Glycine max
Glyma.13G000500 0.5kb upstream 0.5kb upstream 500 false Chr13: 153946-154445 Glycine max
Glyma.13G000500 0.5kb downstream 0.5kb downstream 1459 true Chr13: 154446-155904 Glycine max
Glyma.13G000500 0.5kb downstream 0.5kb downstream 500 false Chr13: 155405-155904 Glycine max
Glyma.13G000500 1.0kb upstream 1.0kb upstream 1959 true Chr13: 153446-155404 Glycine max
Glyma.13G000500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 153446-154445 Glycine max
Glyma.13G000500 1.0kb downstream 1.0kb downstream 1959 true Chr13: 154446-156404 Glycine max
Glyma.13G000500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 155405-156404 Glycine max
Glyma.13G000500 2.0kb upstream 2.0kb upstream 2959 true Chr13: 152446-155404 Glycine max
Glyma.13G000500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 152446-154445 Glycine max
Glyma.13G000500 2.0kb downstream 2.0kb downstream 2959 true Chr13: 154446-157404 Glycine max
Glyma.13G000500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 155405-157404 Glycine max
Glyma.13G000500 5.0kb upstream 5.0kb upstream 5959 true Chr13: 149446-155404 Glycine max
Glyma.13G000500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 149446-154445 Glycine max
Glyma.13G000500 5.0kb downstream 5.0kb downstream 5959 true Chr13: 154446-160404 Glycine max
Glyma.13G000500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 155405-160404 Glycine max
Glyma.13G000500 10.0kb upstream 10.0kb upstream 10959 true Chr13: 144446-155404 Glycine max
Glyma.13G000500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 144446-154445 Glycine max
Glyma.13G000500 10.0kb downstream 10.0kb downstream 10959 true Chr13: 154446-165404 Glycine max
Glyma.13G000500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 155405-165404 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304861 5265 Fabidae View MSA
124068918 5270 Rosid View MSA
123743107 5271 Pentapetalae View MSA
122794839 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4624 0.0 12.1532    
cufflinks 3.41773 0.0 12.0194    
cufflinks 3.32304 0.0 11.6892    
cufflinks 1.97903 0.0 7.22212    
cufflinks 2.01841 0.0 7.34865    
cufflinks 0.728939 0.0 2.79094   Low
cufflinks 2.50953 0.0 9.02637    
cufflinks 1.27628 0.0 4.76254   Low
cufflinks 2.67135 0.0 9.55738    
cufflinks 1.408       Low
cufflinks 1.473        
cufflinks 5.213       High
cufflinks 2.353        
cufflinks 2.553        
cufflinks 2.749        
cufflinks 3.934        
cufflinks 0.937       Low
cufflinks 6.012       High
cufflinks 4.592        
cufflinks 4.25        
cufflinks 1.847        
cufflinks 4.882        
cufflinks 4.668        
cufflinks 1.264       Low
cufflinks 5.135       High
cufflinks 0.951       Low

0 Strain