Gene : Glyma.13G033400 G. max Wm82.a2.v1
Defline:  (1 of 9) PF00069//PF13947 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  334
Name:  ? Glyma.13G033400 Secondary Identifier:  ? PAC:30500712
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G033400 0.5kb upstream 0.5kb upstream 4514 true Chr13: 10549359-10553872 Glycine max
Glyma.13G033400 0.5kb upstream 0.5kb upstream 500 false Chr13: 10553373-10553872 Glycine max
Glyma.13G033400 0.5kb downstream 0.5kb downstream 4514 true Chr13: 10548859-10553372 Glycine max
Glyma.13G033400 0.5kb downstream 0.5kb downstream 500 false Chr13: 10548859-10549358 Glycine max
Glyma.13G033400 1.0kb upstream 1.0kb upstream 5014 true Chr13: 10549359-10554372 Glycine max
Glyma.13G033400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10553373-10554372 Glycine max
Glyma.13G033400 1.0kb downstream 1.0kb downstream 5014 true Chr13: 10548359-10553372 Glycine max
Glyma.13G033400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10548359-10549358 Glycine max
Glyma.13G033400 2.0kb upstream 2.0kb upstream 6014 true Chr13: 10549359-10555372 Glycine max
Glyma.13G033400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10553373-10555372 Glycine max
Glyma.13G033400 2.0kb downstream 2.0kb downstream 6014 true Chr13: 10547359-10553372 Glycine max
Glyma.13G033400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10547359-10549358 Glycine max
Glyma.13G033400 5.0kb upstream 5.0kb upstream 9014 true Chr13: 10549359-10558372 Glycine max
Glyma.13G033400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10553373-10558372 Glycine max
Glyma.13G033400 5.0kb downstream 5.0kb downstream 9014 true Chr13: 10544359-10553372 Glycine max
Glyma.13G033400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10544359-10549358 Glycine max
Glyma.13G033400 10.0kb upstream 10.0kb upstream 14014 true Chr13: 10549359-10563372 Glycine max
Glyma.13G033400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10553373-10563372 Glycine max
Glyma.13G033400 10.0kb downstream 10.0kb downstream 14014 true Chr13: 10539359-10553372 Glycine max
Glyma.13G033400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10539359-10549358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9474 0.0 91.9506 High High
cufflinks 1.12291 0.0 6.0826    
cufflinks 30.9471 0.0 112.818 High High
cufflinks 0.206695 0.0 1.02747    
cufflinks 0.104888 0.0 0.413644 Low  
cufflinks 0.479796 0.0 2.26312    
cufflinks 0.00988921 0.0 0.0519948 Low Low
cufflinks 0.74372 0.0 4.41819    
cufflinks 0.334626 0.0 2.2497    
cufflinks 0.707        
cufflinks 0.126        
cufflinks 5.505       High
cufflinks 0.02     Low Low
cufflinks 0.008     Low Low
cufflinks 0.247        
cufflinks 4.618       High
cufflinks 0.44        
cufflinks 1.032        
cufflinks 0.886        
cufflinks 3.812        
cufflinks 0.069        
cufflinks 4.48       High
cufflinks 5.074       High
cufflinks 0.175        
cufflinks 3.442        
cufflinks 0.043     Low Low

0 Strain