Gene : Glyma.13G025900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  259
Name:  ? Glyma.13G025900 Secondary Identifier:  ? PAC:30504064
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G025900 0.5kb upstream 0.5kb upstream 7271 true Chr13: 5331545-5338815 Glycine max
Glyma.13G025900 0.5kb upstream 0.5kb upstream 500 false Chr13: 5338316-5338815 Glycine max
Glyma.13G025900 0.5kb downstream 0.5kb downstream 7271 true Chr13: 5331045-5338315 Glycine max
Glyma.13G025900 0.5kb downstream 0.5kb downstream 500 false Chr13: 5331045-5331544 Glycine max
Glyma.13G025900 1.0kb upstream 1.0kb upstream 7771 true Chr13: 5331545-5339315 Glycine max
Glyma.13G025900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 5338316-5339315 Glycine max
Glyma.13G025900 1.0kb downstream 1.0kb downstream 7771 true Chr13: 5330545-5338315 Glycine max
Glyma.13G025900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 5330545-5331544 Glycine max
Glyma.13G025900 2.0kb upstream 2.0kb upstream 8771 true Chr13: 5331545-5340315 Glycine max
Glyma.13G025900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 5338316-5340315 Glycine max
Glyma.13G025900 2.0kb downstream 2.0kb downstream 8771 true Chr13: 5329545-5338315 Glycine max
Glyma.13G025900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 5329545-5331544 Glycine max
Glyma.13G025900 5.0kb upstream 5.0kb upstream 11771 true Chr13: 5331545-5343315 Glycine max
Glyma.13G025900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 5338316-5343315 Glycine max
Glyma.13G025900 5.0kb downstream 5.0kb downstream 11771 true Chr13: 5326545-5338315 Glycine max
Glyma.13G025900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 5326545-5331544 Glycine max
Glyma.13G025900 10.0kb upstream 10.0kb upstream 16771 true Chr13: 5331545-5348315 Glycine max
Glyma.13G025900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 5338316-5348315 Glycine max
Glyma.13G025900 10.0kb downstream 10.0kb downstream 16771 true Chr13: 5321545-5338315 Glycine max
Glyma.13G025900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 5321545-5331544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306007 5265 Fabidae View MSA
124068106 5270 Rosid View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5697 0.0 44.3788    
cufflinks 12.8377 0.0 34.2496   Low
cufflinks 18.8558 0.0 50.763   High
cufflinks 16.9666 0.0 45.4816    
cufflinks 14.8922 0.0 39.785    
cufflinks 17.55 0.0 47.0833    
cufflinks 19.5455 0.0 52.6111   High
cufflinks 14.4148 0.0 38.4969    
cufflinks 14.3478 0.0 38.3112    
cufflinks 4.617       Low
cufflinks 8.72     High High
cufflinks 7.175        
cufflinks 5.846        
cufflinks 5.886        
cufflinks 8.458     High High
cufflinks 5.921        
cufflinks 6.403     High  
cufflinks 5.984        
cufflinks 5.69        
cufflinks 5.666        
cufflinks 8.041     High High
cufflinks 5.708        
cufflinks 5.874        
cufflinks 8.501     High High
cufflinks 5.563        
cufflinks 7.414     High  

0 Strain