Gene : Glyma.13G072700 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.7.1.148 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / CMK Genomic Order:  727
Name:  ? Glyma.13G072700 Secondary Identifier:  ? PAC:30502198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7560 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G072700 0.5kb upstream 0.5kb upstream 15675 true Chr13: 17397249-17412923 Glycine max
Glyma.13G072700 0.5kb upstream 0.5kb upstream 500 false Chr13: 17412424-17412923 Glycine max
Glyma.13G072700 0.5kb downstream 0.5kb downstream 15675 true Chr13: 17396749-17412423 Glycine max
Glyma.13G072700 0.5kb downstream 0.5kb downstream 500 false Chr13: 17396749-17397248 Glycine max
Glyma.13G072700 1.0kb upstream 1.0kb upstream 16175 true Chr13: 17397249-17413423 Glycine max
Glyma.13G072700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 17412424-17413423 Glycine max
Glyma.13G072700 1.0kb downstream 1.0kb downstream 16175 true Chr13: 17396249-17412423 Glycine max
Glyma.13G072700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 17396249-17397248 Glycine max
Glyma.13G072700 2.0kb upstream 2.0kb upstream 17175 true Chr13: 17397249-17414423 Glycine max
Glyma.13G072700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 17412424-17414423 Glycine max
Glyma.13G072700 2.0kb downstream 2.0kb downstream 17175 true Chr13: 17395249-17412423 Glycine max
Glyma.13G072700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 17395249-17397248 Glycine max
Glyma.13G072700 5.0kb upstream 5.0kb upstream 20175 true Chr13: 17397249-17417423 Glycine max
Glyma.13G072700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 17412424-17417423 Glycine max
Glyma.13G072700 5.0kb downstream 5.0kb downstream 20175 true Chr13: 17392249-17412423 Glycine max
Glyma.13G072700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 17392249-17397248 Glycine max
Glyma.13G072700 10.0kb upstream 10.0kb upstream 25175 true Chr13: 17397249-17422423 Glycine max
Glyma.13G072700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 17412424-17422423 Glycine max
Glyma.13G072700 10.0kb downstream 10.0kb downstream 25175 true Chr13: 17387249-17412423 Glycine max
Glyma.13G072700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 17387249-17397248 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301142 5265 Fabidae View MSA
124062770 5270 Rosid View MSA
123737425 5271 Pentapetalae View MSA
122788330 5272 Eudicot View MSA
122044611 5273 Angiosperm View MSA
121345778 5274 Embryophyte View MSA
123424084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3171 0.0 69.6667   High
cufflinks 6.51716 0.0 25.9404    
cufflinks 5.98459 0.0 25.1235   Low
cufflinks 7.64449 0.0 29.2164    
cufflinks 8.91013 0.0 33.0175    
cufflinks 17.6637 0.0 60.6432   High
cufflinks 10.466 0.0 38.042    
cufflinks 7.32749 0.0 28.409    
cufflinks 8.84412 0.0 33.1595    
cufflinks 0.421        
cufflinks 0.363        
cufflinks 0.377        
cufflinks 0.674       High
cufflinks 0.466        
cufflinks 0.171       Low
cufflinks 0.512        
cufflinks 0.518        
cufflinks 0.584       High
cufflinks 0.382        
cufflinks 0.406        
cufflinks 0.382        
cufflinks 0.466        
cufflinks 0.65       High
cufflinks 0.466        
cufflinks 0.398        
cufflinks 0.34        

0 Strain