Gene : Glyma.13G078500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0982 - Centrosomal protein Nuf Genomic Order:  785
Name:  ? Glyma.13G078500 Secondary Identifier:  ? PAC:30502392
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G078500 0.5kb upstream 0.5kb upstream 6338 true Chr13: 18454438-18460775 Glycine max
Glyma.13G078500 0.5kb upstream 0.5kb upstream 500 false Chr13: 18460276-18460775 Glycine max
Glyma.13G078500 0.5kb downstream 0.5kb downstream 6338 true Chr13: 18453938-18460275 Glycine max
Glyma.13G078500 0.5kb downstream 0.5kb downstream 500 false Chr13: 18453938-18454437 Glycine max
Glyma.13G078500 1.0kb upstream 1.0kb upstream 6838 true Chr13: 18454438-18461275 Glycine max
Glyma.13G078500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 18460276-18461275 Glycine max
Glyma.13G078500 1.0kb downstream 1.0kb downstream 6838 true Chr13: 18453438-18460275 Glycine max
Glyma.13G078500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 18453438-18454437 Glycine max
Glyma.13G078500 2.0kb upstream 2.0kb upstream 7838 true Chr13: 18454438-18462275 Glycine max
Glyma.13G078500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 18460276-18462275 Glycine max
Glyma.13G078500 2.0kb downstream 2.0kb downstream 7838 true Chr13: 18452438-18460275 Glycine max
Glyma.13G078500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 18452438-18454437 Glycine max
Glyma.13G078500 5.0kb upstream 5.0kb upstream 10838 true Chr13: 18454438-18465275 Glycine max
Glyma.13G078500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 18460276-18465275 Glycine max
Glyma.13G078500 5.0kb downstream 5.0kb downstream 10838 true Chr13: 18449438-18460275 Glycine max
Glyma.13G078500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 18449438-18454437 Glycine max
Glyma.13G078500 10.0kb upstream 10.0kb upstream 15838 true Chr13: 18454438-18470275 Glycine max
Glyma.13G078500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 18460276-18470275 Glycine max
Glyma.13G078500 10.0kb downstream 10.0kb downstream 15838 true Chr13: 18444438-18460275 Glycine max
Glyma.13G078500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 18444438-18454437 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313865 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73131 0.0 6.48753    
cufflinks 10.2012 0.0 39.6396   High
cufflinks 0.754772 0.0 3.53871   Low
cufflinks 1.62441 0.0 8.03479    
cufflinks 2.89372 0.0 12.278    
cufflinks 2.03061 0.0 9.75413    
cufflinks 1.75494 0.0 8.51319    
cufflinks 0.883147 0.0 3.96846    
cufflinks 1.46794 0.0 6.78722    
cufflinks 0.729        
cufflinks 0.047     Low Low
cufflinks 0.991        
cufflinks 0.92        
cufflinks 1.195        
cufflinks 0.042     Low Low
cufflinks 2.036        
cufflinks 0.062     Low Low
cufflinks 1.215        
cufflinks 2.761       High
cufflinks 1.546        
cufflinks 0.076       Low
cufflinks 2.106        
cufflinks 2.43        
cufflinks 0.039     Low Low
cufflinks 1.846        
cufflinks 0.17        

0 Strain