Gene : Glyma.13G079800 G. max Wm82.a2.v1
Defline:  (1 of 13) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  798
Name:  ? Glyma.13G079800 Secondary Identifier:  ? PAC:30504407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G079800 0.5kb upstream 0.5kb upstream 2569 true Chr13: 18621628-18624196 Glycine max
Glyma.13G079800 0.5kb upstream 0.5kb upstream 500 false Chr13: 18623697-18624196 Glycine max
Glyma.13G079800 0.5kb downstream 0.5kb downstream 2569 true Chr13: 18621128-18623696 Glycine max
Glyma.13G079800 0.5kb downstream 0.5kb downstream 500 false Chr13: 18621128-18621627 Glycine max
Glyma.13G079800 1.0kb upstream 1.0kb upstream 3069 true Chr13: 18621628-18624696 Glycine max
Glyma.13G079800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 18623697-18624696 Glycine max
Glyma.13G079800 1.0kb downstream 1.0kb downstream 3069 true Chr13: 18620628-18623696 Glycine max
Glyma.13G079800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 18620628-18621627 Glycine max
Glyma.13G079800 2.0kb upstream 2.0kb upstream 4069 true Chr13: 18621628-18625696 Glycine max
Glyma.13G079800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 18623697-18625696 Glycine max
Glyma.13G079800 2.0kb downstream 2.0kb downstream 4069 true Chr13: 18619628-18623696 Glycine max
Glyma.13G079800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 18619628-18621627 Glycine max
Glyma.13G079800 5.0kb upstream 5.0kb upstream 7069 true Chr13: 18621628-18628696 Glycine max
Glyma.13G079800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 18623697-18628696 Glycine max
Glyma.13G079800 5.0kb downstream 5.0kb downstream 7069 true Chr13: 18616628-18623696 Glycine max
Glyma.13G079800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 18616628-18621627 Glycine max
Glyma.13G079800 10.0kb upstream 10.0kb upstream 12069 true Chr13: 18621628-18633696 Glycine max
Glyma.13G079800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 18623697-18633696 Glycine max
Glyma.13G079800 10.0kb downstream 10.0kb downstream 12069 true Chr13: 18611628-18623696 Glycine max
Glyma.13G079800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 18611628-18621627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311811 5265 Fabidae View MSA
124067867 5270 Rosid View MSA
123750206 5271 Pentapetalae View MSA
122796157 5272 Eudicot View MSA
122043304 5273 Angiosperm View MSA
121310104 5274 Embryophyte View MSA
123347686 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6978 0.0 6.2258    
cufflinks 6.98631 0.0 22.3438    
cufflinks 14.1841 0.0 41.0149   High
cufflinks 7.98558 0.0 25.0023    
cufflinks 0.507969 0.0 1.96806    
cufflinks 0.66297 0.0 2.53969    
cufflinks 0.435575 0.0 1.69882   Low
cufflinks 5.50579 0.0 18.1499    
cufflinks 0.453273 0.0 1.76378   Low
cufflinks 13.933     High  
cufflinks 0.11        
cufflinks 18.521     High High
cufflinks 0.092     Low Low
cufflinks 0.006     Low Low
cufflinks 0.128        
cufflinks 10.843     High  
cufflinks 0.492        
cufflinks 18.468     High High
cufflinks 6.24        
cufflinks 8.252     High  
cufflinks 0.313        
cufflinks 8.719     High  
cufflinks 11.611     High  
cufflinks 0.11        
cufflinks 9.285     High  
cufflinks 0.332        

0 Strain