Gene : Glyma.13G058900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33349:SF1 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  589
Name:  ? Glyma.13G058900 Secondary Identifier:  ? PAC:30501323
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G058900 0.5kb upstream 0.5kb upstream 4158 true Chr13: 15628719-15632876 Glycine max
Glyma.13G058900 0.5kb upstream 0.5kb upstream 500 false Chr13: 15632377-15632876 Glycine max
Glyma.13G058900 0.5kb downstream 0.5kb downstream 4158 true Chr13: 15628219-15632376 Glycine max
Glyma.13G058900 0.5kb downstream 0.5kb downstream 500 false Chr13: 15628219-15628718 Glycine max
Glyma.13G058900 1.0kb upstream 1.0kb upstream 4658 true Chr13: 15628719-15633376 Glycine max
Glyma.13G058900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15632377-15633376 Glycine max
Glyma.13G058900 1.0kb downstream 1.0kb downstream 4658 true Chr13: 15627719-15632376 Glycine max
Glyma.13G058900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15627719-15628718 Glycine max
Glyma.13G058900 2.0kb upstream 2.0kb upstream 5658 true Chr13: 15628719-15634376 Glycine max
Glyma.13G058900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15632377-15634376 Glycine max
Glyma.13G058900 2.0kb downstream 2.0kb downstream 5658 true Chr13: 15626719-15632376 Glycine max
Glyma.13G058900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15626719-15628718 Glycine max
Glyma.13G058900 5.0kb upstream 5.0kb upstream 8658 true Chr13: 15628719-15637376 Glycine max
Glyma.13G058900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15632377-15637376 Glycine max
Glyma.13G058900 5.0kb downstream 5.0kb downstream 8658 true Chr13: 15623719-15632376 Glycine max
Glyma.13G058900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15623719-15628718 Glycine max
Glyma.13G058900 10.0kb upstream 10.0kb upstream 13658 true Chr13: 15628719-15642376 Glycine max
Glyma.13G058900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15632377-15642376 Glycine max
Glyma.13G058900 10.0kb downstream 10.0kb downstream 13658 true Chr13: 15618719-15632376 Glycine max
Glyma.13G058900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15618719-15628718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306349 5265 Fabidae View MSA
124071368 5270 Rosid View MSA
123747266 5271 Pentapetalae View MSA
122791700 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0882 0.0 3.65471   Low
cufflinks 2.06541 0.0 6.33891    
cufflinks 4.74766 0.0 13.138    
cufflinks 1.73065 0.0 5.43093    
cufflinks 2.94267 0.0 8.62549    
cufflinks 22.0989 0.0 60.2797   High
cufflinks 4.5086 0.0 12.5924    
cufflinks 2.18796 0.0 6.63793    
cufflinks 6.41209 0.0 17.3958    
cufflinks 1.939        
cufflinks 2.228        
cufflinks 3.472       High
cufflinks 2.826        
cufflinks 1.283        
cufflinks 9.155     High High
cufflinks 0.891        
cufflinks 0.913        
cufflinks 2.361        
cufflinks 1.332        
cufflinks 0.87        
cufflinks 1.571        
cufflinks 0.841        
cufflinks 0.719       Low
cufflinks 2.104        
cufflinks 0.891        
cufflinks 1.717        

0 Strain