Gene : Glyma.13G047900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4002 - Uncharacterized integral membrane protein Genomic Order:  479
Name:  ? Glyma.13G047900 Secondary Identifier:  ? PAC:30500425
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G047900 0.5kb upstream 0.5kb upstream 6135 true Chr13: 14333624-14339758 Glycine max
Glyma.13G047900 0.5kb upstream 0.5kb upstream 500 false Chr13: 14339259-14339758 Glycine max
Glyma.13G047900 0.5kb downstream 0.5kb downstream 6135 true Chr13: 14333124-14339258 Glycine max
Glyma.13G047900 0.5kb downstream 0.5kb downstream 500 false Chr13: 14333124-14333623 Glycine max
Glyma.13G047900 1.0kb upstream 1.0kb upstream 6635 true Chr13: 14333624-14340258 Glycine max
Glyma.13G047900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14339259-14340258 Glycine max
Glyma.13G047900 1.0kb downstream 1.0kb downstream 6635 true Chr13: 14332624-14339258 Glycine max
Glyma.13G047900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14332624-14333623 Glycine max
Glyma.13G047900 2.0kb upstream 2.0kb upstream 7635 true Chr13: 14333624-14341258 Glycine max
Glyma.13G047900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14339259-14341258 Glycine max
Glyma.13G047900 2.0kb downstream 2.0kb downstream 7635 true Chr13: 14331624-14339258 Glycine max
Glyma.13G047900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14331624-14333623 Glycine max
Glyma.13G047900 5.0kb upstream 5.0kb upstream 10635 true Chr13: 14333624-14344258 Glycine max
Glyma.13G047900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14339259-14344258 Glycine max
Glyma.13G047900 5.0kb downstream 5.0kb downstream 10635 true Chr13: 14328624-14339258 Glycine max
Glyma.13G047900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14328624-14333623 Glycine max
Glyma.13G047900 10.0kb upstream 10.0kb upstream 15635 true Chr13: 14333624-14349258 Glycine max
Glyma.13G047900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14339259-14349258 Glycine max
Glyma.13G047900 10.0kb downstream 10.0kb downstream 15635 true Chr13: 14323624-14339258 Glycine max
Glyma.13G047900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14323624-14333623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301195 5265 Fabidae View MSA
124065263 5270 Rosid View MSA
123736943 5271 Pentapetalae View MSA
122785665 5272 Eudicot View MSA
122046623 5273 Angiosperm View MSA
121350815 5274 Embryophyte View MSA
123425961 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7752 0.0 82.3346 High  
cufflinks 20.6959 0.0 72.1263 High Low
cufflinks 39.7023 0.0 139.748 High High
cufflinks 25.2884 0.0 87.3975 High  
cufflinks 25.1526 0.0 86.722 High  
cufflinks 30.0952 0.0 105.935 High  
cufflinks 25.2697 0.0 86.9609 High  
cufflinks 28.0733 0.0 97.0007 High  
cufflinks 21.2784 0.0 75.6722 High Low
cufflinks 3.444        
cufflinks 2.389        
cufflinks 4.886       High
cufflinks 3.851       High
cufflinks 3.822       High
cufflinks 1.922       Low
cufflinks 2.336        
cufflinks 2.881        
cufflinks 4.026       High
cufflinks 3.024        
cufflinks 2.449        
cufflinks 2.402        
cufflinks 2.576        
cufflinks 2.757        
cufflinks 2.693        
cufflinks 2.22       Low
cufflinks 2.731        

0 Strain