Protein Family : expressed protein 123425961

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  103

103 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28583.t000003 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED R. communis v0.1 5524   28583: 29944-35467
Cucsa.238200 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO C. sativus v1.0 4224   scaffold02023: 845733-849956
orange1.1g018799m.g (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO C. sinensis v1.1 4042   scaffold00071: 138174-142215
AT3G02420 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO A. thaliana TAIR10 2957   Chr3: 495885-498841
Thhalv10021061m.g (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO E. salsugineum v1.0 3212   scaffold_13: 8972826-8976037
Ciclev10012116m.g (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO C. clementina v1.0 4094   scaffold_6: 23462487-23466580
Lus10034084.g (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2669   scaffold292: 1035775-1038443
Lus10003064.g (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2764   scaffold888: 72278-75041
Gorai.001G082400 (1 of 3) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO G. raimondii v2.1 4578   Chr01: 8754863-8759440
Gorai.001G203600 (1 of 3) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO G. raimondii v2.1 3259   Chr01: 39594918-39598176
Gorai.004G047400 (1 of 3) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO G. raimondii v2.1 5390   Chr04: 4216852-4222241
estExt_Genemark1.C_220119 (1 of 1) PF03661 - Uncharacterised protein family (UPF0121) (UPF0121) C. subellipsoidea C-169 v2.0 4012   scaffold_22: 619756-623767
e_gw1.14.11.1 (1 of 1) PF03661 - Uncharacterised protein family (UPF0121) (UPF0121) M. pusilla CCMP1545 v3.0 774   scaffold_14: 15210-15983
est_cluster_kg.Chr_15__84__3200466:1 (1 of 1) PF03661 - Uncharacterised protein family (UPF0121) (UPF0121) M. sp RCC299 v3.0 834   Chr_15: 732956-733789
ost_04_023_055 (1 of 1) PF03661 - Uncharacterised protein family (UPF0121) (UPF0121) O. lucimarinus v2.0 783   Chr_4: 873522-874304
Thecc1EG019603 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED T. cacao v1.1 6722   scaffold_4: 23864581-23871302
Migut.H00537 (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO M. guttatus v2.0 4168   scaffold_8: 3196071-3200238
Migut.K00863 (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO M. guttatus v2.0 3785   scaffold_11: 10409009-10412793
Araha.2210s0004 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO A. halleri v1.1 2787   Scaffold2210: 9334-12120
Cagra.1194s0062 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO C. grandiflora v1.1 2901   Scaffold1194: 180834-183734
Glyma.13G047900 (1 of 1) KOG4002 - Uncharacterized integral membrane protein G. max Wm82.a2.v1 5635   Chr13: 14333624-14339258
Glyma.19G043700 (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO G. max Wm82.a2.v1 3310   Chr19: 6419163-6422472
Brara.A03897 (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO B. rapa FPsc v1.3 2825   A01: 30682582-30685406
Brara.E03581 (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO B. rapa FPsc v1.3 2645   A05: 28047540-28050184
Bostr.1460s0156 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO B. stricta v1.2 2804   Scaffold1460: 646188-648991
Cre02.g099650 (1 of 1) PF03661 - Uncharacterised protein family (UPF0121) (UPF0121) C. reinhardtii v5.6 4766   chromosome_2: 4394915-4399680
Medtr6g016780 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO M. truncatula Mt4.0v1 6278   chr6: 6447946-6454223
SapurV1A.0191s0050 (1 of 3) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED S. purpurea v1.0 5949   chr17: 14206315-14212263
evm_27.TU.AmTr_v1.0_scaffold00058.144 (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO A. trichopoda v1.0 14608   AmTr_v1.0_scaffold00058: 2530851-2545458
Traes_1AL_C62D86AA8 (1 of 7) PTHR30603//PTHR30603:SF21 - RNA POLYMERASE SIGMA FACTOR RPO T. aestivum v2.2 4029   ta_iwgsc_1al_v2_2756030: 1791-5819

103 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28583.m000109 R. communis v0.1 123425961 expressed protein 1 5275 Viridiplantae
Cucsa.238200.1 C. sativus v1.0 123425961 expressed protein 1 5275 Viridiplantae
orange1.1g018799m C. sinensis v1.1 123425961 expressed protein 1 5275 Viridiplantae
AT3G02420.1 A. thaliana TAIR10 123425961 expressed protein 1 5275 Viridiplantae
Thhalv10021061m E. salsugineum v1.0 123425961 expressed protein 1 5275 Viridiplantae
Ciclev10012116m C. clementina v1.0 123425961 expressed protein 1 5275 Viridiplantae
Lus10034084 L. usitatissimum v1.0 123425961 expressed protein 2 5275 Viridiplantae
Lus10003064 L. usitatissimum v1.0 123425961 expressed protein 2 5275 Viridiplantae
Gorai.001G082400.1 G. raimondii v2.1 123425961 expressed protein 3 5275 Viridiplantae
Gorai.001G203600.1 G. raimondii v2.1 123425961 expressed protein 3 5275 Viridiplantae
Gorai.004G047400.1 G. raimondii v2.1 123425961 expressed protein 3 5275 Viridiplantae
68176 C. subellipsoidea C-169 v2.0 123425961 expressed protein 1 5275 Viridiplantae
163637 M. pusilla CCMP1545 v3.0 123425961 expressed protein 1 5275 Viridiplantae
109602 M. sp RCC299 v3.0 123425961 expressed protein 1 5275 Viridiplantae
92674 O. lucimarinus v2.0 123425961 expressed protein 1 5275 Viridiplantae
Thecc1EG019603t1 T. cacao v1.1 123425961 expressed protein 1 5275 Viridiplantae
Migut.H00537.1.p M. guttatus v2.0 123425961 expressed protein 2 5275 Viridiplantae
Migut.K00863.1.p M. guttatus v2.0 123425961 expressed protein 2 5275 Viridiplantae
Araha.2210s0004.1.p A. halleri v1.1 123425961 expressed protein 1 5275 Viridiplantae
Cagra.1194s0062.1.p C. grandiflora v1.1 123425961 expressed protein 1 5275 Viridiplantae
Glyma.13G047900.1.p G. max Wm82.a2.v1 123425961 expressed protein 2 5275 Viridiplantae
Glyma.19G043700.1.p G. max Wm82.a2.v1 123425961 expressed protein 2 5275 Viridiplantae
Brara.A03897.1.p B. rapa FPsc v1.3 123425961 expressed protein 2 5275 Viridiplantae
Brara.E03581.1.p B. rapa FPsc v1.3 123425961 expressed protein 2 5275 Viridiplantae
Bostr.1460s0156.1.p B. stricta v1.2 123425961 expressed protein 1 5275 Viridiplantae
Cre02.g099650.t1.2 C. reinhardtii v5.6 123425961 expressed protein 1 5275 Viridiplantae
Medtr6g016780.1 M. truncatula Mt4.0v1 123425961 expressed protein 1 5275 Viridiplantae
SapurV1A.0191s0050.1.p S. purpurea v1.0 123425961 expressed protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00058.144 A. trichopoda v1.0 123425961 expressed protein 1 5275 Viridiplantae
Traes_1AL_C62D86AA8.1 T. aestivum v2.2 123425961 expressed protein 1 5275 Viridiplantae