Gene : Brara.E03581 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  3581
Name:  ? Brara.E03581 Secondary Identifier:  ? PAC:30627040
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03581 0.5kb upstream 0.5kb upstream 3145 true A05: 28047040-28050184 Brassica rapa FPsc
Brara.E03581 0.5kb upstream 0.5kb upstream 500 false A05: 28047040-28047539 Brassica rapa FPsc
Brara.E03581 0.5kb downstream 0.5kb downstream 3145 true A05: 28047540-28050684 Brassica rapa FPsc
Brara.E03581 0.5kb downstream 0.5kb downstream 500 false A05: 28050185-28050684 Brassica rapa FPsc
Brara.E03581 1.0kb upstream 1.0kb upstream 3645 true A05: 28046540-28050184 Brassica rapa FPsc
Brara.E03581 1.0kb upstream 1.0kb upstream 1000 false A05: 28046540-28047539 Brassica rapa FPsc
Brara.E03581 1.0kb downstream 1.0kb downstream 3645 true A05: 28047540-28051184 Brassica rapa FPsc
Brara.E03581 1.0kb downstream 1.0kb downstream 1000 false A05: 28050185-28051184 Brassica rapa FPsc
Brara.E03581 2.0kb upstream 2.0kb upstream 4645 true A05: 28045540-28050184 Brassica rapa FPsc
Brara.E03581 2.0kb upstream 2.0kb upstream 2000 false A05: 28045540-28047539 Brassica rapa FPsc
Brara.E03581 2.0kb downstream 2.0kb downstream 4645 true A05: 28047540-28052184 Brassica rapa FPsc
Brara.E03581 2.0kb downstream 2.0kb downstream 2000 false A05: 28050185-28052184 Brassica rapa FPsc
Brara.E03581 5.0kb upstream 5.0kb upstream 7645 true A05: 28042540-28050184 Brassica rapa FPsc
Brara.E03581 5.0kb upstream 5.0kb upstream 5000 false A05: 28042540-28047539 Brassica rapa FPsc
Brara.E03581 5.0kb downstream 5.0kb downstream 7645 true A05: 28047540-28055184 Brassica rapa FPsc
Brara.E03581 5.0kb downstream 5.0kb downstream 5000 false A05: 28050185-28055184 Brassica rapa FPsc
Brara.E03581 10.0kb upstream 10.0kb upstream 12645 true A05: 28037540-28050184 Brassica rapa FPsc
Brara.E03581 10.0kb upstream 10.0kb upstream 10000 false A05: 28037540-28047539 Brassica rapa FPsc
Brara.E03581 10.0kb downstream 10.0kb downstream 12645 true A05: 28047540-28060184 Brassica rapa FPsc
Brara.E03581 10.0kb downstream 10.0kb downstream 10000 false A05: 28050185-28060184 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370838 5261 Brassicaceae View MSA
123839319 5264 Brassicales-Malvales View MSA
124346578 5266 SBM View MSA
124247755 5268 Malvidae View MSA
124065263 5270 Rosid View MSA
123736943 5271 Pentapetalae View MSA
122785665 5272 Eudicot View MSA
122046623 5273 Angiosperm View MSA
121350815 5274 Embryophyte View MSA
123425961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier