Gene : Gorai.001G203600 G. raimondii v2.1
Defline:  (1 of 3) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  2036
Name:  ? Gorai.001G203600 Secondary Identifier:  ? PAC:26822155
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G203600 0.5kb upstream 0.5kb upstream 3759 true Chr01: 39594918-39598676 Gossypium raimondii
Gorai.001G203600 0.5kb upstream 0.5kb upstream 500 false Chr01: 39598177-39598676 Gossypium raimondii
Gorai.001G203600 0.5kb downstream 0.5kb downstream 3759 true Chr01: 39594418-39598176 Gossypium raimondii
Gorai.001G203600 0.5kb downstream 0.5kb downstream 500 false Chr01: 39594418-39594917 Gossypium raimondii
Gorai.001G203600 1.0kb upstream 1.0kb upstream 4259 true Chr01: 39594918-39599176 Gossypium raimondii
Gorai.001G203600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39598177-39599176 Gossypium raimondii
Gorai.001G203600 1.0kb downstream 1.0kb downstream 4259 true Chr01: 39593918-39598176 Gossypium raimondii
Gorai.001G203600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39593918-39594917 Gossypium raimondii
Gorai.001G203600 2.0kb upstream 2.0kb upstream 5259 true Chr01: 39594918-39600176 Gossypium raimondii
Gorai.001G203600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39598177-39600176 Gossypium raimondii
Gorai.001G203600 2.0kb downstream 2.0kb downstream 5259 true Chr01: 39592918-39598176 Gossypium raimondii
Gorai.001G203600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39592918-39594917 Gossypium raimondii
Gorai.001G203600 5.0kb upstream 5.0kb upstream 8259 true Chr01: 39594918-39603176 Gossypium raimondii
Gorai.001G203600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39598177-39603176 Gossypium raimondii
Gorai.001G203600 5.0kb downstream 5.0kb downstream 8259 true Chr01: 39589918-39598176 Gossypium raimondii
Gorai.001G203600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39589918-39594917 Gossypium raimondii
Gorai.001G203600 10.0kb upstream 10.0kb upstream 13259 true Chr01: 39594918-39608176 Gossypium raimondii
Gorai.001G203600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39598177-39608176 Gossypium raimondii
Gorai.001G203600 10.0kb downstream 10.0kb downstream 13259 true Chr01: 39584918-39598176 Gossypium raimondii
Gorai.001G203600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39584918-39594917 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839319 5264 Brassicales-Malvales View MSA
124346578 5266 SBM View MSA
124247755 5268 Malvidae View MSA
124065263 5270 Rosid View MSA
123736943 5271 Pentapetalae View MSA
122785665 5272 Eudicot View MSA
122046623 5273 Angiosperm View MSA
121350815 5274 Embryophyte View MSA
123425961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain