Gene : Ciclev10012116m.g C. clementina v1.0
Defline:  (1 of 1) PTHR30603//PTHR30603:SF18 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  1855
Name:  ? Ciclev10012116m.g Secondary Identifier:  ? PAC:20798515
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10012116m.g 0.5kb upstream 0.5kb upstream 4594 true scaffold_6: 23462487-23467080 Citrus clementina
Ciclev10012116m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23466581-23467080 Citrus clementina
Ciclev10012116m.g 0.5kb downstream 0.5kb downstream 4594 true scaffold_6: 23461987-23466580 Citrus clementina
Ciclev10012116m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23461987-23462486 Citrus clementina
Ciclev10012116m.g 1.0kb upstream 1.0kb upstream 5094 true scaffold_6: 23462487-23467580 Citrus clementina
Ciclev10012116m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23466581-23467580 Citrus clementina
Ciclev10012116m.g 1.0kb downstream 1.0kb downstream 5094 true scaffold_6: 23461487-23466580 Citrus clementina
Ciclev10012116m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23461487-23462486 Citrus clementina
Ciclev10012116m.g 2.0kb upstream 2.0kb upstream 6094 true scaffold_6: 23462487-23468580 Citrus clementina
Ciclev10012116m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23466581-23468580 Citrus clementina
Ciclev10012116m.g 2.0kb downstream 2.0kb downstream 6094 true scaffold_6: 23460487-23466580 Citrus clementina
Ciclev10012116m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23460487-23462486 Citrus clementina
Ciclev10012116m.g 5.0kb upstream 5.0kb upstream 9094 true scaffold_6: 23462487-23471580 Citrus clementina
Ciclev10012116m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23466581-23471580 Citrus clementina
Ciclev10012116m.g 5.0kb downstream 5.0kb downstream 9094 true scaffold_6: 23457487-23466580 Citrus clementina
Ciclev10012116m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23457487-23462486 Citrus clementina
Ciclev10012116m.g 10.0kb upstream 10.0kb upstream 14094 true scaffold_6: 23462487-23476580 Citrus clementina
Ciclev10012116m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23466581-23476580 Citrus clementina
Ciclev10012116m.g 10.0kb downstream 10.0kb downstream 14094 true scaffold_6: 23452487-23466580 Citrus clementina
Ciclev10012116m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23452487-23462486 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346578 5266 SBM View MSA
124247755 5268 Malvidae View MSA
124065263 5270 Rosid View MSA
123736943 5271 Pentapetalae View MSA
122785665 5272 Eudicot View MSA
122046623 5273 Angiosperm View MSA
121350815 5274 Embryophyte View MSA
123425961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain