Gene : Glyma.13G049600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Genomic Order:  496
Name:  ? Glyma.13G049600 Secondary Identifier:  ? PAC:30501610
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G049600 0.5kb upstream 0.5kb upstream 4273 true Chr13: 14552490-14556762 Glycine max
Glyma.13G049600 0.5kb upstream 0.5kb upstream 500 false Chr13: 14552490-14552989 Glycine max
Glyma.13G049600 0.5kb downstream 0.5kb downstream 4273 true Chr13: 14552990-14557262 Glycine max
Glyma.13G049600 0.5kb downstream 0.5kb downstream 500 false Chr13: 14556763-14557262 Glycine max
Glyma.13G049600 1.0kb upstream 1.0kb upstream 4773 true Chr13: 14551990-14556762 Glycine max
Glyma.13G049600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14551990-14552989 Glycine max
Glyma.13G049600 1.0kb downstream 1.0kb downstream 4773 true Chr13: 14552990-14557762 Glycine max
Glyma.13G049600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14556763-14557762 Glycine max
Glyma.13G049600 2.0kb upstream 2.0kb upstream 5773 true Chr13: 14550990-14556762 Glycine max
Glyma.13G049600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14550990-14552989 Glycine max
Glyma.13G049600 2.0kb downstream 2.0kb downstream 5773 true Chr13: 14552990-14558762 Glycine max
Glyma.13G049600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14556763-14558762 Glycine max
Glyma.13G049600 5.0kb upstream 5.0kb upstream 8773 true Chr13: 14547990-14556762 Glycine max
Glyma.13G049600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14547990-14552989 Glycine max
Glyma.13G049600 5.0kb downstream 5.0kb downstream 8773 true Chr13: 14552990-14561762 Glycine max
Glyma.13G049600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14556763-14561762 Glycine max
Glyma.13G049600 10.0kb upstream 10.0kb upstream 13773 true Chr13: 14542990-14556762 Glycine max
Glyma.13G049600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14542990-14552989 Glycine max
Glyma.13G049600 10.0kb downstream 10.0kb downstream 13773 true Chr13: 14552990-14566762 Glycine max
Glyma.13G049600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14556763-14566762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314799 5265 Fabidae View MSA
124072986 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.874 0.0 45.8754    
cufflinks 11.8881 0.0 33.1858    
cufflinks 12.7458 0.0 35.2704    
cufflinks 13.7481 0.0 37.8879    
cufflinks 18.2042 0.0 49.2755    
cufflinks 25.3355 0.0 67.7119 High High
cufflinks 11.9464 0.0 33.3852    
cufflinks 23.1015 0.0 61.9065 High High
cufflinks 13.1654 0.0 36.3945    
cufflinks 6.978       High
cufflinks 4.785        
cufflinks 2.874       Low
cufflinks 5.753       High
cufflinks 6.368       High
cufflinks 2.723       Low
cufflinks 4.916        
cufflinks 3.179       Low
cufflinks 4.4        
cufflinks 3.776        
cufflinks 4.358        
cufflinks 5.095        
cufflinks 4.076        
cufflinks 4.405        
cufflinks 5.083        
cufflinks 4.145        
cufflinks 4.133        

0 Strain