Gene : Glyma.13G050300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED Genomic Order:  503
Name:  ? Glyma.13G050300 Secondary Identifier:  ? PAC:30502996
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G050300 0.5kb upstream 0.5kb upstream 2678 true Chr13: 14629894-14632571 Glycine max
Glyma.13G050300 0.5kb upstream 0.5kb upstream 500 false Chr13: 14629894-14630393 Glycine max
Glyma.13G050300 0.5kb downstream 0.5kb downstream 2678 true Chr13: 14630394-14633071 Glycine max
Glyma.13G050300 0.5kb downstream 0.5kb downstream 500 false Chr13: 14632572-14633071 Glycine max
Glyma.13G050300 1.0kb upstream 1.0kb upstream 3178 true Chr13: 14629394-14632571 Glycine max
Glyma.13G050300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14629394-14630393 Glycine max
Glyma.13G050300 1.0kb downstream 1.0kb downstream 3178 true Chr13: 14630394-14633571 Glycine max
Glyma.13G050300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14632572-14633571 Glycine max
Glyma.13G050300 2.0kb upstream 2.0kb upstream 4178 true Chr13: 14628394-14632571 Glycine max
Glyma.13G050300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14628394-14630393 Glycine max
Glyma.13G050300 2.0kb downstream 2.0kb downstream 4178 true Chr13: 14630394-14634571 Glycine max
Glyma.13G050300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14632572-14634571 Glycine max
Glyma.13G050300 5.0kb upstream 5.0kb upstream 7178 true Chr13: 14625394-14632571 Glycine max
Glyma.13G050300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14625394-14630393 Glycine max
Glyma.13G050300 5.0kb downstream 5.0kb downstream 7178 true Chr13: 14630394-14637571 Glycine max
Glyma.13G050300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14632572-14637571 Glycine max
Glyma.13G050300 10.0kb upstream 10.0kb upstream 12178 true Chr13: 14620394-14632571 Glycine max
Glyma.13G050300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14620394-14630393 Glycine max
Glyma.13G050300 10.0kb downstream 10.0kb downstream 12178 true Chr13: 14630394-14642571 Glycine max
Glyma.13G050300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14632572-14642571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250521 5265 Fabidae View MSA
124065921 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0772787 0.0 0.314819 Low  
cufflinks 0.0564491 0.0 0.234083 Low  
cufflinks 0.0754378 0.0 0.308108 Low  
cufflinks 0.0104883 0.0 0.0504282 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.184094 0.0 0.724479 Low High
cufflinks 0.018733 0.0 0.0847847 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.145       High
cufflinks 0.008     Low Low
cufflinks 0.028     Low  
cufflinks 0.007     Low Low
cufflinks 0.006     Low Low
cufflinks 0.008     Low Low
cufflinks 0.208       High
cufflinks 0.119        
cufflinks 0.088     Low  
cufflinks 0.04     Low  
cufflinks 0.066     Low  
cufflinks 0.011     Low  
cufflinks 0.131        
cufflinks 0.243       High
cufflinks 0.026     Low  
cufflinks 0.132        
cufflinks 0.011     Low  

0 Strain