Gene : Glyma.13G055400 G. max Wm82.a2.v1
Defline:  (1 of 7) K18635 - protein SPIRAL1 and related proteins (SPR1) Genomic Order:  554
Name:  ? Glyma.13G055400 Secondary Identifier:  ? PAC:30504231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G055400 0.5kb upstream 0.5kb upstream 2541 true Chr13: 15248277-15250817 Glycine max
Glyma.13G055400 0.5kb upstream 0.5kb upstream 500 false Chr13: 15250318-15250817 Glycine max
Glyma.13G055400 0.5kb downstream 0.5kb downstream 2541 true Chr13: 15247777-15250317 Glycine max
Glyma.13G055400 0.5kb downstream 0.5kb downstream 500 false Chr13: 15247777-15248276 Glycine max
Glyma.13G055400 1.0kb upstream 1.0kb upstream 3041 true Chr13: 15248277-15251317 Glycine max
Glyma.13G055400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15250318-15251317 Glycine max
Glyma.13G055400 1.0kb downstream 1.0kb downstream 3041 true Chr13: 15247277-15250317 Glycine max
Glyma.13G055400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15247277-15248276 Glycine max
Glyma.13G055400 2.0kb upstream 2.0kb upstream 4041 true Chr13: 15248277-15252317 Glycine max
Glyma.13G055400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15250318-15252317 Glycine max
Glyma.13G055400 2.0kb downstream 2.0kb downstream 4041 true Chr13: 15246277-15250317 Glycine max
Glyma.13G055400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15246277-15248276 Glycine max
Glyma.13G055400 5.0kb upstream 5.0kb upstream 7041 true Chr13: 15248277-15255317 Glycine max
Glyma.13G055400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15250318-15255317 Glycine max
Glyma.13G055400 5.0kb downstream 5.0kb downstream 7041 true Chr13: 15243277-15250317 Glycine max
Glyma.13G055400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15243277-15248276 Glycine max
Glyma.13G055400 10.0kb upstream 10.0kb upstream 12041 true Chr13: 15248277-15260317 Glycine max
Glyma.13G055400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15250318-15260317 Glycine max
Glyma.13G055400 10.0kb downstream 10.0kb downstream 12041 true Chr13: 15238277-15250317 Glycine max
Glyma.13G055400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15238277-15248276 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314267 5265 Fabidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.974 0.0 412.639 High  
cufflinks 197.608 0.0 585.39 High  
cufflinks 91.4219 0.0 249.055 High Low
cufflinks 161.695 0.0 466.711 High  
cufflinks 243.689 0.0 750.752 High  
cufflinks 277.235 0.0 873.4 High High
cufflinks 137.965 0.0 390.884 High  
cufflinks 326.77 0.0 1061.57 High High
cufflinks 143.761 0.0 409.472 High  
cufflinks 137.814     High High
cufflinks 12.463     High Low
cufflinks 28.869     High  
cufflinks 90.524     High High
cufflinks 102.564     High High
cufflinks 12.846     High Low
cufflinks 58.136     High  
cufflinks 42.098     High  
cufflinks 55.82     High  
cufflinks 66.954     High  
cufflinks 58.486     High  
cufflinks 25.023     High  
cufflinks 62.402     High  
cufflinks 56.271     High  
cufflinks 16.026     High Low
cufflinks 55.243     High  
cufflinks 32.953     High  

0 Strain