Gene : Glyma.13G100700 G. max Wm82.a2.v1
Defline:  (1 of 68) PF06203 - CCT motif (CCT) Genomic Order:  1007
Name:  ? Glyma.13G100700 Secondary Identifier:  ? PAC:30500519
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G100700 0.5kb upstream 0.5kb upstream 4228 true Chr13: 21588821-21593048 Glycine max
Glyma.13G100700 0.5kb upstream 0.5kb upstream 500 false Chr13: 21592549-21593048 Glycine max
Glyma.13G100700 0.5kb downstream 0.5kb downstream 4228 true Chr13: 21588321-21592548 Glycine max
Glyma.13G100700 0.5kb downstream 0.5kb downstream 500 false Chr13: 21588321-21588820 Glycine max
Glyma.13G100700 1.0kb upstream 1.0kb upstream 4728 true Chr13: 21588821-21593548 Glycine max
Glyma.13G100700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21592549-21593548 Glycine max
Glyma.13G100700 1.0kb downstream 1.0kb downstream 4728 true Chr13: 21587821-21592548 Glycine max
Glyma.13G100700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21587821-21588820 Glycine max
Glyma.13G100700 2.0kb upstream 2.0kb upstream 5728 true Chr13: 21588821-21594548 Glycine max
Glyma.13G100700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21592549-21594548 Glycine max
Glyma.13G100700 2.0kb downstream 2.0kb downstream 5728 true Chr13: 21586821-21592548 Glycine max
Glyma.13G100700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21586821-21588820 Glycine max
Glyma.13G100700 5.0kb upstream 5.0kb upstream 8728 true Chr13: 21588821-21597548 Glycine max
Glyma.13G100700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21592549-21597548 Glycine max
Glyma.13G100700 5.0kb downstream 5.0kb downstream 8728 true Chr13: 21583821-21592548 Glycine max
Glyma.13G100700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21583821-21588820 Glycine max
Glyma.13G100700 10.0kb upstream 10.0kb upstream 13728 true Chr13: 21588821-21602548 Glycine max
Glyma.13G100700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21592549-21602548 Glycine max
Glyma.13G100700 10.0kb downstream 10.0kb downstream 13728 true Chr13: 21578821-21592548 Glycine max
Glyma.13G100700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21578821-21588820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302114 5265 Fabidae View MSA
124066149 5270 Rosid View MSA
123741675 5271 Pentapetalae View MSA
122787863 5272 Eudicot View MSA
122044342 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121310281 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1831 0.0 51.8352   High
cufflinks 7.22254 0.0 25.8181   High
cufflinks 1.60008 0.0 8.9554    
cufflinks 1.93687 0.0 10.1038    
cufflinks 2.46293 0.0 11.4779    
cufflinks 1.48571 0.0 8.35698    
cufflinks 3.06299 0.0 13.4275    
cufflinks 2.90877 0.0 13.0934    
cufflinks 1.1999 0.0 7.20346   Low
cufflinks 0.631        
cufflinks 0.015     Low Low
cufflinks 0.694        
cufflinks 0.132        
cufflinks 0.048     Low  
cufflinks 0.051     Low  
cufflinks 3.39       High
cufflinks 0.529        
cufflinks 0.436        
cufflinks 1.425        
cufflinks 4.075       High
cufflinks 0.01     Low Low
cufflinks 3.881       High
cufflinks 3.894       High
cufflinks 0.023     Low Low
cufflinks 3.092       High
cufflinks 0.061     Low  

0 Strain