Gene : Glyma.13G101100 G. max Wm82.a2.v1
Defline:  (1 of 309) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  1011
Name:  ? Glyma.13G101100 Secondary Identifier:  ? PAC:30505192
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G101100 0.5kb upstream 0.5kb upstream 2591 true Chr13: 21624113-21626703 Glycine max
Glyma.13G101100 0.5kb upstream 0.5kb upstream 500 false Chr13: 21626204-21626703 Glycine max
Glyma.13G101100 0.5kb downstream 0.5kb downstream 2591 true Chr13: 21623613-21626203 Glycine max
Glyma.13G101100 0.5kb downstream 0.5kb downstream 500 false Chr13: 21623613-21624112 Glycine max
Glyma.13G101100 1.0kb upstream 1.0kb upstream 3091 true Chr13: 21624113-21627203 Glycine max
Glyma.13G101100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21626204-21627203 Glycine max
Glyma.13G101100 1.0kb downstream 1.0kb downstream 3091 true Chr13: 21623113-21626203 Glycine max
Glyma.13G101100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21623113-21624112 Glycine max
Glyma.13G101100 2.0kb upstream 2.0kb upstream 4091 true Chr13: 21624113-21628203 Glycine max
Glyma.13G101100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21626204-21628203 Glycine max
Glyma.13G101100 2.0kb downstream 2.0kb downstream 4091 true Chr13: 21622113-21626203 Glycine max
Glyma.13G101100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21622113-21624112 Glycine max
Glyma.13G101100 5.0kb upstream 5.0kb upstream 7091 true Chr13: 21624113-21631203 Glycine max
Glyma.13G101100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21626204-21631203 Glycine max
Glyma.13G101100 5.0kb downstream 5.0kb downstream 7091 true Chr13: 21619113-21626203 Glycine max
Glyma.13G101100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21619113-21624112 Glycine max
Glyma.13G101100 10.0kb upstream 10.0kb upstream 12091 true Chr13: 21624113-21636203 Glycine max
Glyma.13G101100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21626204-21636203 Glycine max
Glyma.13G101100 10.0kb downstream 10.0kb downstream 12091 true Chr13: 21614113-21626203 Glycine max
Glyma.13G101100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21614113-21624112 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255355 5265 Fabidae View MSA
124067726 5270 Rosid View MSA
123740187 5271 Pentapetalae View MSA
122797618 5272 Eudicot View MSA
122050016 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.69459 0.0 11.7109    
cufflinks 2.12697 0.0 7.23842    
cufflinks 2.76466 0.0 9.07639    
cufflinks 9.57364 0.0 26.7527    
cufflinks 2.45097 0.0 8.21126    
cufflinks 17.8976 0.0 48.0419   High
cufflinks 1.18773 0.0 4.26262   Low
cufflinks 16.2523 0.0 43.7694   High
cufflinks 4.23446 0.0 13.1259    
cufflinks 20.641     High High
cufflinks 3.367        
cufflinks 3.912        
cufflinks 2.008        
cufflinks 0.2       Low
cufflinks 3.381        
cufflinks 1.702        
cufflinks 72.595     High High
cufflinks 0.947        
cufflinks 2.498        
cufflinks 0.493       Low
cufflinks 5.508        
cufflinks 0.99        
cufflinks 3.786        
cufflinks 5.287        
cufflinks 0.665       Low
cufflinks 11.151     High  

0 Strain