Gene : Glyma.13G101900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31752:SF4 - AUXIN EFFLUX CARRIER COMPONENT 2 Genomic Order:  1019
Name:  ? Glyma.13G101900 Secondary Identifier:  ? PAC:30504024
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G101900 0.5kb upstream 0.5kb upstream 3969 true Chr13: 21723985-21727953 Glycine max
Glyma.13G101900 0.5kb upstream 0.5kb upstream 500 false Chr13: 21727454-21727953 Glycine max
Glyma.13G101900 0.5kb downstream 0.5kb downstream 3969 true Chr13: 21723485-21727453 Glycine max
Glyma.13G101900 0.5kb downstream 0.5kb downstream 500 false Chr13: 21723485-21723984 Glycine max
Glyma.13G101900 1.0kb upstream 1.0kb upstream 4469 true Chr13: 21723985-21728453 Glycine max
Glyma.13G101900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21727454-21728453 Glycine max
Glyma.13G101900 1.0kb downstream 1.0kb downstream 4469 true Chr13: 21722985-21727453 Glycine max
Glyma.13G101900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21722985-21723984 Glycine max
Glyma.13G101900 2.0kb upstream 2.0kb upstream 5469 true Chr13: 21723985-21729453 Glycine max
Glyma.13G101900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21727454-21729453 Glycine max
Glyma.13G101900 2.0kb downstream 2.0kb downstream 5469 true Chr13: 21721985-21727453 Glycine max
Glyma.13G101900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21721985-21723984 Glycine max
Glyma.13G101900 5.0kb upstream 5.0kb upstream 8469 true Chr13: 21723985-21732453 Glycine max
Glyma.13G101900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21727454-21732453 Glycine max
Glyma.13G101900 5.0kb downstream 5.0kb downstream 8469 true Chr13: 21718985-21727453 Glycine max
Glyma.13G101900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21718985-21723984 Glycine max
Glyma.13G101900 10.0kb upstream 10.0kb upstream 13469 true Chr13: 21723985-21737453 Glycine max
Glyma.13G101900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21727454-21737453 Glycine max
Glyma.13G101900 10.0kb downstream 10.0kb downstream 13469 true Chr13: 21713985-21727453 Glycine max
Glyma.13G101900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21713985-21723984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304711 5265 Fabidae View MSA
124063005 5270 Rosid View MSA
123747112 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00580193 0.0 0.0274503 Low Low
cufflinks 0.145867 0.0 0.562908 Low  
cufflinks 18.58 0.0 49.8159   High
cufflinks 9.45162 0.0 25.3873    
cufflinks 0.627742 0.0 2.25085    
cufflinks 0.0182876 0.0 0.0779819 Low Low
cufflinks 6.49835 0.0 17.8221    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.93        
cufflinks 0.008     Low Low
cufflinks 24.524     High High
cufflinks 34.476     High High
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.055        
cufflinks 0.003     Low Low
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.538        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.4        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.892        

0 Strain