Gene : Glyma.13G094200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  942
Name:  ? Glyma.13G094200 Secondary Identifier:  ? PAC:30500726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G094200 0.5kb upstream 0.5kb upstream 1941 true Chr13: 20940808-20942748 Glycine max
Glyma.13G094200 0.5kb upstream 0.5kb upstream 500 false Chr13: 20942249-20942748 Glycine max
Glyma.13G094200 0.5kb downstream 0.5kb downstream 1941 true Chr13: 20940308-20942248 Glycine max
Glyma.13G094200 0.5kb downstream 0.5kb downstream 500 false Chr13: 20940308-20940807 Glycine max
Glyma.13G094200 1.0kb upstream 1.0kb upstream 2441 true Chr13: 20940808-20943248 Glycine max
Glyma.13G094200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20942249-20943248 Glycine max
Glyma.13G094200 1.0kb downstream 1.0kb downstream 2441 true Chr13: 20939808-20942248 Glycine max
Glyma.13G094200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20939808-20940807 Glycine max
Glyma.13G094200 2.0kb upstream 2.0kb upstream 3441 true Chr13: 20940808-20944248 Glycine max
Glyma.13G094200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20942249-20944248 Glycine max
Glyma.13G094200 2.0kb downstream 2.0kb downstream 3441 true Chr13: 20938808-20942248 Glycine max
Glyma.13G094200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20938808-20940807 Glycine max
Glyma.13G094200 5.0kb upstream 5.0kb upstream 6441 true Chr13: 20940808-20947248 Glycine max
Glyma.13G094200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20942249-20947248 Glycine max
Glyma.13G094200 5.0kb downstream 5.0kb downstream 6441 true Chr13: 20935808-20942248 Glycine max
Glyma.13G094200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20935808-20940807 Glycine max
Glyma.13G094200 10.0kb upstream 10.0kb upstream 11441 true Chr13: 20940808-20952248 Glycine max
Glyma.13G094200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20942249-20952248 Glycine max
Glyma.13G094200 10.0kb downstream 10.0kb downstream 11441 true Chr13: 20930808-20942248 Glycine max
Glyma.13G094200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20930808-20940807 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299944 5265 Fabidae View MSA
124071232 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03227 0.0 3.75906   Low
cufflinks 4.26267 0.0 13.4622    
cufflinks 19.5499 0.0 52.5093    
cufflinks 5.42732 0.0 16.5164    
cufflinks 43.753 0.0 117.975 High  
cufflinks 416.35 0.0 1654.82 High High
cufflinks 0.235774 0.0 0.91956   Low
cufflinks 129.951 0.0 392.713 High  
cufflinks 33.6887 0.0 90.0366 High  
cufflinks 9.796     High High
cufflinks 1.592        
cufflinks 3.558        
cufflinks 15.495     High High
cufflinks 9.977     High High
cufflinks 0.832       Low
cufflinks 1.927        
cufflinks 10.297     High High
cufflinks 2.1        
cufflinks 3.286        
cufflinks 2.086        
cufflinks 5.532        
cufflinks 2.144        
cufflinks 2.418        
cufflinks 1.609        
cufflinks 2.461        
cufflinks 2.715        

0 Strain