Gene : Glyma.13G096100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21236//PTHR21236:SF9 - GOLGI MEMBRANE PROTEIN YIP1 Genomic Order:  961
Name:  ? Glyma.13G096100 Secondary Identifier:  ? PAC:30505581
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G096100 0.5kb upstream 0.5kb upstream 4698 true Chr13: 21095142-21099839 Glycine max
Glyma.13G096100 0.5kb upstream 0.5kb upstream 500 false Chr13: 21095142-21095641 Glycine max
Glyma.13G096100 0.5kb downstream 0.5kb downstream 4698 true Chr13: 21095642-21100339 Glycine max
Glyma.13G096100 0.5kb downstream 0.5kb downstream 500 false Chr13: 21099840-21100339 Glycine max
Glyma.13G096100 1.0kb upstream 1.0kb upstream 5198 true Chr13: 21094642-21099839 Glycine max
Glyma.13G096100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21094642-21095641 Glycine max
Glyma.13G096100 1.0kb downstream 1.0kb downstream 5198 true Chr13: 21095642-21100839 Glycine max
Glyma.13G096100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21099840-21100839 Glycine max
Glyma.13G096100 2.0kb upstream 2.0kb upstream 6198 true Chr13: 21093642-21099839 Glycine max
Glyma.13G096100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21093642-21095641 Glycine max
Glyma.13G096100 2.0kb downstream 2.0kb downstream 6198 true Chr13: 21095642-21101839 Glycine max
Glyma.13G096100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21099840-21101839 Glycine max
Glyma.13G096100 5.0kb upstream 5.0kb upstream 9198 true Chr13: 21090642-21099839 Glycine max
Glyma.13G096100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21090642-21095641 Glycine max
Glyma.13G096100 5.0kb downstream 5.0kb downstream 9198 true Chr13: 21095642-21104839 Glycine max
Glyma.13G096100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21099840-21104839 Glycine max
Glyma.13G096100 10.0kb upstream 10.0kb upstream 14198 true Chr13: 21085642-21099839 Glycine max
Glyma.13G096100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21085642-21095641 Glycine max
Glyma.13G096100 10.0kb downstream 10.0kb downstream 14198 true Chr13: 21095642-21109839 Glycine max
Glyma.13G096100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21099840-21109839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301054 5265 Fabidae View MSA
124062311 5270 Rosid View MSA
123737556 5271 Pentapetalae View MSA
122791123 5272 Eudicot View MSA
122046860 5273 Angiosperm View MSA
121349329 5274 Embryophyte View MSA
123428190 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0775 0.0 116.555 High  
cufflinks 25.2822 0.0 121.46 High  
cufflinks 22.28 0.0 94.0527 High  
cufflinks 32.0687 0.0 126.5 High High
cufflinks 32.3635 0.0 153.74 High High
cufflinks 21.445 0.0 104.252    
cufflinks 21.4965 0.0 85.1687    
cufflinks 36.295 0.0 141.644 High High
cufflinks 20.9825 0.0 85.575 High  
cufflinks 2.945       High
cufflinks 0.696       Low
cufflinks 1.433        
cufflinks 2.183       High
cufflinks 2.303       High
cufflinks 1.083        
cufflinks 1.583        
cufflinks 1.111        
cufflinks 1.937        
cufflinks 2.373       High
cufflinks 1.528        
cufflinks 1.102        
cufflinks 1.55        
cufflinks 1.694        
cufflinks 0.922       Low
cufflinks 1.496        
cufflinks 1.005       Low

0 Strain