Gene : Glyma.13G096800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13989:SF20 - REPLICATION PROTEIN A 32 KDA SUBUNIT B Genomic Order:  968
Name:  ? Glyma.13G096800 Secondary Identifier:  ? PAC:30505452
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G096800 0.5kb upstream 0.5kb upstream 7454 true Chr13: 21172338-21179791 Glycine max
Glyma.13G096800 0.5kb upstream 0.5kb upstream 500 false Chr13: 21172338-21172837 Glycine max
Glyma.13G096800 0.5kb downstream 0.5kb downstream 7454 true Chr13: 21172838-21180291 Glycine max
Glyma.13G096800 0.5kb downstream 0.5kb downstream 500 false Chr13: 21179792-21180291 Glycine max
Glyma.13G096800 1.0kb upstream 1.0kb upstream 7954 true Chr13: 21171838-21179791 Glycine max
Glyma.13G096800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21171838-21172837 Glycine max
Glyma.13G096800 1.0kb downstream 1.0kb downstream 7954 true Chr13: 21172838-21180791 Glycine max
Glyma.13G096800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21179792-21180791 Glycine max
Glyma.13G096800 2.0kb upstream 2.0kb upstream 8954 true Chr13: 21170838-21179791 Glycine max
Glyma.13G096800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21170838-21172837 Glycine max
Glyma.13G096800 2.0kb downstream 2.0kb downstream 8954 true Chr13: 21172838-21181791 Glycine max
Glyma.13G096800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21179792-21181791 Glycine max
Glyma.13G096800 5.0kb upstream 5.0kb upstream 11954 true Chr13: 21167838-21179791 Glycine max
Glyma.13G096800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21167838-21172837 Glycine max
Glyma.13G096800 5.0kb downstream 5.0kb downstream 11954 true Chr13: 21172838-21184791 Glycine max
Glyma.13G096800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21179792-21184791 Glycine max
Glyma.13G096800 10.0kb upstream 10.0kb upstream 16954 true Chr13: 21162838-21179791 Glycine max
Glyma.13G096800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21162838-21172837 Glycine max
Glyma.13G096800 10.0kb downstream 10.0kb downstream 16954 true Chr13: 21172838-21189791 Glycine max
Glyma.13G096800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21179792-21189791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300749 5265 Fabidae View MSA
124063788 5270 Rosid View MSA
123740037 5271 Pentapetalae View MSA
122788776 5272 Eudicot View MSA
122049363 5273 Angiosperm View MSA
121347176 5274 Embryophyte View MSA
123425085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.44457 0.0 19.178    
cufflinks 9.50895 0.0 26.9081    
cufflinks 5.90545 0.0 17.7148   Low
cufflinks 7.41597 0.0 21.6291    
cufflinks 15.3843 0.0 41.8585   High
cufflinks 13.5068 0.0 37.0426   High
cufflinks 5.96889 0.0 18.0113    
cufflinks 6.55117 0.0 19.438    
cufflinks 10.7922 0.0 30.1584    
cufflinks 1.513        
cufflinks 0.809       Low
cufflinks 1.398        
cufflinks 2.598       High
cufflinks 2.693       High
cufflinks 1.154        
cufflinks 1.07        
cufflinks 0.835       Low
cufflinks 1.49        
cufflinks 2.038       High
cufflinks 0.808       Low
cufflinks 0.896        
cufflinks 0.977        
cufflinks 1.766        
cufflinks 1.419        
cufflinks 0.893        
cufflinks 1.095        

0 Strain