Gene : Glyma.13G087800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11931:SF6 - PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE Genomic Order:  878
Name:  ? Glyma.13G087800 Secondary Identifier:  ? PAC:30502473
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G087800 0.5kb upstream 0.5kb upstream 6020 true Chr13: 20079305-20085324 Glycine max
Glyma.13G087800 0.5kb upstream 0.5kb upstream 500 false Chr13: 20079305-20079804 Glycine max
Glyma.13G087800 0.5kb downstream 0.5kb downstream 6020 true Chr13: 20079805-20085824 Glycine max
Glyma.13G087800 0.5kb downstream 0.5kb downstream 500 false Chr13: 20085325-20085824 Glycine max
Glyma.13G087800 1.0kb upstream 1.0kb upstream 6520 true Chr13: 20078805-20085324 Glycine max
Glyma.13G087800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20078805-20079804 Glycine max
Glyma.13G087800 1.0kb downstream 1.0kb downstream 6520 true Chr13: 20079805-20086324 Glycine max
Glyma.13G087800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20085325-20086324 Glycine max
Glyma.13G087800 2.0kb upstream 2.0kb upstream 7520 true Chr13: 20077805-20085324 Glycine max
Glyma.13G087800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20077805-20079804 Glycine max
Glyma.13G087800 2.0kb downstream 2.0kb downstream 7520 true Chr13: 20079805-20087324 Glycine max
Glyma.13G087800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20085325-20087324 Glycine max
Glyma.13G087800 5.0kb upstream 5.0kb upstream 10520 true Chr13: 20074805-20085324 Glycine max
Glyma.13G087800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20074805-20079804 Glycine max
Glyma.13G087800 5.0kb downstream 5.0kb downstream 10520 true Chr13: 20079805-20090324 Glycine max
Glyma.13G087800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20085325-20090324 Glycine max
Glyma.13G087800 10.0kb upstream 10.0kb upstream 15520 true Chr13: 20069805-20085324 Glycine max
Glyma.13G087800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20069805-20079804 Glycine max
Glyma.13G087800 10.0kb downstream 10.0kb downstream 15520 true Chr13: 20079805-20095324 Glycine max
Glyma.13G087800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20085325-20095324 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254941 5265 Fabidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526317 0.0 3.04563   Low
cufflinks 16.3848 0.0 54.4306   High
cufflinks 3.35616 0.0 12.8892    
cufflinks 14.2127 0.0 40.7462   High
cufflinks 1.18066 0.0 5.77171    
cufflinks 4.59922 0.0 15.799    
cufflinks 1.73242 0.0 7.88114    
cufflinks 7.75163 0.0 24.0666    
cufflinks 1.00321 0.0 5.12972    
cufflinks 2.964        
cufflinks 0.006     Low Low
cufflinks 2.067        
cufflinks 0.057     Low  
cufflinks 0.207        
cufflinks 0.233        
cufflinks 1.591        
cufflinks 0.172        
cufflinks 11.022     High High
cufflinks 5.923       High
cufflinks 0.656        
cufflinks 0.005     Low Low
cufflinks 1.312        
cufflinks 1.162        
cufflinks 0.004     Low Low
cufflinks 1.535        
cufflinks 0.179        

0 Strain