Gene : Glyma.13G089500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10992:SF837 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  895
Name:  ? Glyma.13G089500 Secondary Identifier:  ? PAC:30501491
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G089500 0.5kb upstream 0.5kb upstream 9053 true Chr13: 20388034-20397086 Glycine max
Glyma.13G089500 0.5kb upstream 0.5kb upstream 500 false Chr13: 20388034-20388533 Glycine max
Glyma.13G089500 0.5kb downstream 0.5kb downstream 9053 true Chr13: 20388534-20397586 Glycine max
Glyma.13G089500 0.5kb downstream 0.5kb downstream 500 false Chr13: 20397087-20397586 Glycine max
Glyma.13G089500 1.0kb upstream 1.0kb upstream 9553 true Chr13: 20387534-20397086 Glycine max
Glyma.13G089500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20387534-20388533 Glycine max
Glyma.13G089500 1.0kb downstream 1.0kb downstream 9553 true Chr13: 20388534-20398086 Glycine max
Glyma.13G089500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20397087-20398086 Glycine max
Glyma.13G089500 2.0kb upstream 2.0kb upstream 10553 true Chr13: 20386534-20397086 Glycine max
Glyma.13G089500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20386534-20388533 Glycine max
Glyma.13G089500 2.0kb downstream 2.0kb downstream 10553 true Chr13: 20388534-20399086 Glycine max
Glyma.13G089500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20397087-20399086 Glycine max
Glyma.13G089500 5.0kb upstream 5.0kb upstream 13553 true Chr13: 20383534-20397086 Glycine max
Glyma.13G089500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20383534-20388533 Glycine max
Glyma.13G089500 5.0kb downstream 5.0kb downstream 13553 true Chr13: 20388534-20402086 Glycine max
Glyma.13G089500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20397087-20402086 Glycine max
Glyma.13G089500 10.0kb upstream 10.0kb upstream 18553 true Chr13: 20378534-20397086 Glycine max
Glyma.13G089500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20378534-20388533 Glycine max
Glyma.13G089500 10.0kb downstream 10.0kb downstream 18553 true Chr13: 20388534-20407086 Glycine max
Glyma.13G089500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20397087-20407086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306958 5265 Fabidae View MSA
124070753 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.304083 0.0 1.47972    
cufflinks 2.18999 0.0 11.0247   High
cufflinks 1.3804 0.0 5.70658    
cufflinks 0.367753 0.0 2.61522    
cufflinks 0.450504 0.0 2.19429    
cufflinks 1.36834 0.0 5.49106    
cufflinks 1.24016 0.0 5.32213    
cufflinks 0.133691 0.0 0.526154 Low Low
cufflinks 0.211775 0.0 1.04436 Low Low
cufflinks 0.158        
cufflinks 0.016     Low  
cufflinks 0.166        
cufflinks 0.078     Low  
cufflinks 0.045     Low  
cufflinks 0.003     Low Low
cufflinks 0.141        
cufflinks 0.012     Low Low
cufflinks 0.307        
cufflinks 0.59       High
cufflinks 0.17        
cufflinks 0.016     Low  
cufflinks 0.15        
cufflinks 0.549       High
cufflinks 0.006     Low Low
cufflinks 0.181        
cufflinks 0.03     Low  

0 Strain