Gene : Glyma.13G119300 G. max Wm82.a2.v1
Defline:  (1 of 4) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1193
Name:  ? Glyma.13G119300 Secondary Identifier:  ? PAC:30505548
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G119300 0.5kb upstream 0.5kb upstream 5611 true Chr13: 23197515-23203125 Glycine max
Glyma.13G119300 0.5kb upstream 0.5kb upstream 500 false Chr13: 23197515-23198014 Glycine max
Glyma.13G119300 0.5kb downstream 0.5kb downstream 5611 true Chr13: 23198015-23203625 Glycine max
Glyma.13G119300 0.5kb downstream 0.5kb downstream 500 false Chr13: 23203126-23203625 Glycine max
Glyma.13G119300 1.0kb upstream 1.0kb upstream 6111 true Chr13: 23197015-23203125 Glycine max
Glyma.13G119300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23197015-23198014 Glycine max
Glyma.13G119300 1.0kb downstream 1.0kb downstream 6111 true Chr13: 23198015-23204125 Glycine max
Glyma.13G119300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23203126-23204125 Glycine max
Glyma.13G119300 2.0kb upstream 2.0kb upstream 7111 true Chr13: 23196015-23203125 Glycine max
Glyma.13G119300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23196015-23198014 Glycine max
Glyma.13G119300 2.0kb downstream 2.0kb downstream 7111 true Chr13: 23198015-23205125 Glycine max
Glyma.13G119300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23203126-23205125 Glycine max
Glyma.13G119300 5.0kb upstream 5.0kb upstream 10111 true Chr13: 23193015-23203125 Glycine max
Glyma.13G119300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23193015-23198014 Glycine max
Glyma.13G119300 5.0kb downstream 5.0kb downstream 10111 true Chr13: 23198015-23208125 Glycine max
Glyma.13G119300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23203126-23208125 Glycine max
Glyma.13G119300 10.0kb upstream 10.0kb upstream 15111 true Chr13: 23188015-23203125 Glycine max
Glyma.13G119300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23188015-23198014 Glycine max
Glyma.13G119300 10.0kb downstream 10.0kb downstream 15111 true Chr13: 23198015-23213125 Glycine max
Glyma.13G119300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23203126-23213125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309301 5265 Fabidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.79837 0.0 7.55853    
cufflinks 1.86661 0.0 9.30001    
cufflinks 2.4036 0.0 10.7526    
cufflinks 2.48806 0.0 11.4467    
cufflinks 1.50001 0.0 6.73191    
cufflinks 1.57326 0.0 6.89602    
cufflinks 5.30203 0.0 23.7132   High
cufflinks 1.44245 0.0 6.56315    
cufflinks 2.08653 0.0 11.1703    
cufflinks 0.18        
cufflinks 0.123       Low
cufflinks 0.354       High
cufflinks 0.21        
cufflinks 0.25        
cufflinks 0.232        
cufflinks 0.165        
cufflinks 0.11       Low
cufflinks 0.426       High
cufflinks 0.302       High
cufflinks 0.188        
cufflinks 0.115       Low
cufflinks 0.207        
cufflinks 0.243        
cufflinks 0.143        
cufflinks 0.167        
cufflinks 0.12       Low

0 Strain