Gene : Glyma.13G119600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21262:SF12 - CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  1196
Name:  ? Glyma.13G119600 Secondary Identifier:  ? PAC:30506025
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G119600 0.5kb upstream 0.5kb upstream 3871 true Chr13: 23221497-23225367 Glycine max
Glyma.13G119600 0.5kb upstream 0.5kb upstream 500 false Chr13: 23224868-23225367 Glycine max
Glyma.13G119600 0.5kb downstream 0.5kb downstream 3871 true Chr13: 23220997-23224867 Glycine max
Glyma.13G119600 0.5kb downstream 0.5kb downstream 500 false Chr13: 23220997-23221496 Glycine max
Glyma.13G119600 1.0kb upstream 1.0kb upstream 4371 true Chr13: 23221497-23225867 Glycine max
Glyma.13G119600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23224868-23225867 Glycine max
Glyma.13G119600 1.0kb downstream 1.0kb downstream 4371 true Chr13: 23220497-23224867 Glycine max
Glyma.13G119600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23220497-23221496 Glycine max
Glyma.13G119600 2.0kb upstream 2.0kb upstream 5371 true Chr13: 23221497-23226867 Glycine max
Glyma.13G119600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23224868-23226867 Glycine max
Glyma.13G119600 2.0kb downstream 2.0kb downstream 5371 true Chr13: 23219497-23224867 Glycine max
Glyma.13G119600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23219497-23221496 Glycine max
Glyma.13G119600 5.0kb upstream 5.0kb upstream 8371 true Chr13: 23221497-23229867 Glycine max
Glyma.13G119600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23224868-23229867 Glycine max
Glyma.13G119600 5.0kb downstream 5.0kb downstream 8371 true Chr13: 23216497-23224867 Glycine max
Glyma.13G119600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23216497-23221496 Glycine max
Glyma.13G119600 10.0kb upstream 10.0kb upstream 13371 true Chr13: 23221497-23234867 Glycine max
Glyma.13G119600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23224868-23234867 Glycine max
Glyma.13G119600 10.0kb downstream 10.0kb downstream 13371 true Chr13: 23211497-23224867 Glycine max
Glyma.13G119600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23211497-23221496 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300782 5265 Fabidae View MSA
124063676 5270 Rosid View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7893 0.0 40.3695   High
cufflinks 4.75883 0.0 16.1941    
cufflinks 3.95942 0.0 16.4257    
cufflinks 5.30479 0.0 17.5563    
cufflinks 4.89592 0.0 16.4767    
cufflinks 4.62809 0.0 15.8271    
cufflinks 3.83296 0.0 13.823    
cufflinks 4.82391 0.0 16.3289    
cufflinks 7.03548 0.0 22.0585    
cufflinks 1.182        
cufflinks 0.409       Low
cufflinks 1.307        
cufflinks 0.954        
cufflinks 0.564        
cufflinks 1.315        
cufflinks 3.067       High
cufflinks 0.24       Low
cufflinks 1.397        
cufflinks 1.544        
cufflinks 4.612       High
cufflinks 0.519        
cufflinks 3.8       High
cufflinks 1.796        
cufflinks 0.614        
cufflinks 4.086       High
cufflinks 0.62        

0 Strain