Gene : Glyma.13G115500 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.5.1.8 - Saccharopine dehydrogenase (NADP(+), L-lysine-forming) / Lysine-ketoglutarate reductase Genomic Order:  1155
Name:  ? Glyma.13G115500 Secondary Identifier:  ? PAC:30500180
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LYSINE-DEG1-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G115500 0.5kb upstream 0.5kb upstream 11257 true Chr13: 22904355-22915611 Glycine max
Glyma.13G115500 0.5kb upstream 0.5kb upstream 500 false Chr13: 22904355-22904854 Glycine max
Glyma.13G115500 0.5kb downstream 0.5kb downstream 11257 true Chr13: 22904855-22916111 Glycine max
Glyma.13G115500 0.5kb downstream 0.5kb downstream 500 false Chr13: 22915612-22916111 Glycine max
Glyma.13G115500 1.0kb upstream 1.0kb upstream 11757 true Chr13: 22903855-22915611 Glycine max
Glyma.13G115500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22903855-22904854 Glycine max
Glyma.13G115500 1.0kb downstream 1.0kb downstream 11757 true Chr13: 22904855-22916611 Glycine max
Glyma.13G115500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22915612-22916611 Glycine max
Glyma.13G115500 2.0kb upstream 2.0kb upstream 12757 true Chr13: 22902855-22915611 Glycine max
Glyma.13G115500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22902855-22904854 Glycine max
Glyma.13G115500 2.0kb downstream 2.0kb downstream 12757 true Chr13: 22904855-22917611 Glycine max
Glyma.13G115500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22915612-22917611 Glycine max
Glyma.13G115500 5.0kb upstream 5.0kb upstream 15757 true Chr13: 22899855-22915611 Glycine max
Glyma.13G115500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22899855-22904854 Glycine max
Glyma.13G115500 5.0kb downstream 5.0kb downstream 15757 true Chr13: 22904855-22920611 Glycine max
Glyma.13G115500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22915612-22920611 Glycine max
Glyma.13G115500 10.0kb upstream 10.0kb upstream 20757 true Chr13: 22894855-22915611 Glycine max
Glyma.13G115500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22894855-22904854 Glycine max
Glyma.13G115500 10.0kb downstream 10.0kb downstream 20757 true Chr13: 22904855-22925611 Glycine max
Glyma.13G115500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22915612-22925611 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304957 5265 Fabidae View MSA
124068901 5270 Rosid View MSA
123736723 5271 Pentapetalae View MSA
122787907 5272 Eudicot View MSA
122047432 5273 Angiosperm View MSA
121344808 5274 Embryophyte View MSA
123380103 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11818 0.0 3.86679   Low
cufflinks 3.16586 0.0 10.4661    
cufflinks 306.02 0.0 1711.86 High High
cufflinks 3.32424 0.0 10.9166    
cufflinks 8.20896 0.0 24.42    
cufflinks 7.27738 0.0 21.7424    
cufflinks 3.06609 0.0 10.2985    
cufflinks 1.9652 0.0 7.37807    
cufflinks 8.34969 0.0 24.7093    
cufflinks 0.225       Low
cufflinks 1.983        
cufflinks 32.267     High High
cufflinks 1.203        
cufflinks 0.569        
cufflinks 1.242        
cufflinks 0.249        
cufflinks 0.819        
cufflinks 2.525        
cufflinks 1.29        
cufflinks 0.285        
cufflinks 0.839        
cufflinks 0.234        
cufflinks 0.18       Low
cufflinks 2.157        
cufflinks 0.287        
cufflinks 0.834        

0 Strain