Gene : Glyma.13G110900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32378:SF9 - KERATIN-ASSOCIATED PROTEIN 29-1 Genomic Order:  1109
Name:  ? Glyma.13G110900 Secondary Identifier:  ? PAC:30500333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G110900 0.5kb upstream 0.5kb upstream 3839 true Chr13: 22448850-22452688 Glycine max
Glyma.13G110900 0.5kb upstream 0.5kb upstream 500 false Chr13: 22452189-22452688 Glycine max
Glyma.13G110900 0.5kb downstream 0.5kb downstream 3839 true Chr13: 22448350-22452188 Glycine max
Glyma.13G110900 0.5kb downstream 0.5kb downstream 500 false Chr13: 22448350-22448849 Glycine max
Glyma.13G110900 1.0kb upstream 1.0kb upstream 4339 true Chr13: 22448850-22453188 Glycine max
Glyma.13G110900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22452189-22453188 Glycine max
Glyma.13G110900 1.0kb downstream 1.0kb downstream 4339 true Chr13: 22447850-22452188 Glycine max
Glyma.13G110900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22447850-22448849 Glycine max
Glyma.13G110900 2.0kb upstream 2.0kb upstream 5339 true Chr13: 22448850-22454188 Glycine max
Glyma.13G110900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22452189-22454188 Glycine max
Glyma.13G110900 2.0kb downstream 2.0kb downstream 5339 true Chr13: 22446850-22452188 Glycine max
Glyma.13G110900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22446850-22448849 Glycine max
Glyma.13G110900 5.0kb upstream 5.0kb upstream 8339 true Chr13: 22448850-22457188 Glycine max
Glyma.13G110900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22452189-22457188 Glycine max
Glyma.13G110900 5.0kb downstream 5.0kb downstream 8339 true Chr13: 22443850-22452188 Glycine max
Glyma.13G110900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22443850-22448849 Glycine max
Glyma.13G110900 10.0kb upstream 10.0kb upstream 13339 true Chr13: 22448850-22462188 Glycine max
Glyma.13G110900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22452189-22462188 Glycine max
Glyma.13G110900 10.0kb downstream 10.0kb downstream 13339 true Chr13: 22438850-22452188 Glycine max
Glyma.13G110900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22438850-22448849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
122300178 5265 Fabidae View MSA
124071651 5270 Rosid View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.342566 0.0 1.63662    
cufflinks 5.51518 0.0 21.3209   High
cufflinks 0.243839 0.0 1.84032   Low
cufflinks 0.974678 0.0 4.36952    
cufflinks 2.44873 0.0 8.87931    
cufflinks 0.868142 0.0 5.60464    
cufflinks 3.65673 0.0 16.5116   High
cufflinks 0.14021 0.0 0.553692 Low Low
cufflinks 0.939307 0.0 4.27638    
cufflinks 0.146        
cufflinks 0.044     Low Low
cufflinks 0.146        
cufflinks 0.339        
cufflinks 0.546       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.185        
cufflinks 0.03     Low Low
cufflinks 0.186        
cufflinks 0.748       High
cufflinks 0.077     Low  
cufflinks 0.131        
cufflinks 0.129        
cufflinks 0.309        
cufflinks 0.114        
cufflinks 0.138        
cufflinks 0.133        

0 Strain