Gene : Glyma.13G104500 G. max Wm82.a2.v1
Defline:  (1 of 8) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  1045
Name:  ? Glyma.13G104500 Secondary Identifier:  ? PAC:30504870
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G104500 0.5kb upstream 0.5kb upstream 1837 true Chr13: 21917890-21919726 Glycine max
Glyma.13G104500 0.5kb upstream 0.5kb upstream 500 false Chr13: 21917890-21918389 Glycine max
Glyma.13G104500 0.5kb downstream 0.5kb downstream 1837 true Chr13: 21918390-21920226 Glycine max
Glyma.13G104500 0.5kb downstream 0.5kb downstream 500 false Chr13: 21919727-21920226 Glycine max
Glyma.13G104500 1.0kb upstream 1.0kb upstream 2337 true Chr13: 21917390-21919726 Glycine max
Glyma.13G104500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21917390-21918389 Glycine max
Glyma.13G104500 1.0kb downstream 1.0kb downstream 2337 true Chr13: 21918390-21920726 Glycine max
Glyma.13G104500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21919727-21920726 Glycine max
Glyma.13G104500 2.0kb upstream 2.0kb upstream 3337 true Chr13: 21916390-21919726 Glycine max
Glyma.13G104500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21916390-21918389 Glycine max
Glyma.13G104500 2.0kb downstream 2.0kb downstream 3337 true Chr13: 21918390-21921726 Glycine max
Glyma.13G104500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21919727-21921726 Glycine max
Glyma.13G104500 5.0kb upstream 5.0kb upstream 6337 true Chr13: 21913390-21919726 Glycine max
Glyma.13G104500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21913390-21918389 Glycine max
Glyma.13G104500 5.0kb downstream 5.0kb downstream 6337 true Chr13: 21918390-21924726 Glycine max
Glyma.13G104500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21919727-21924726 Glycine max
Glyma.13G104500 10.0kb upstream 10.0kb upstream 11337 true Chr13: 21908390-21919726 Glycine max
Glyma.13G104500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21908390-21918389 Glycine max
Glyma.13G104500 10.0kb downstream 10.0kb downstream 11337 true Chr13: 21918390-21929726 Glycine max
Glyma.13G104500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21919727-21929726 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309435 5265 Fabidae View MSA
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5323 0.0 65.4586 High  
cufflinks 9.29009 0.0 25.9395    
cufflinks 38.3898 0.0 103.417 High  
cufflinks 15.0267 0.0 40.5039    
cufflinks 17.9044 0.0 47.8829    
cufflinks 3.1972 0.0 10.2104   Low
cufflinks 50.689 0.0 139.76 High High
cufflinks 31.3748 0.0 84.1058 High  
cufflinks 5.77588 0.0 16.9485   Low
cufflinks 13.647     High  
cufflinks 0.861        
cufflinks 19.114     High High
cufflinks 3.821        
cufflinks 4.664        
cufflinks 0.027     Low Low
cufflinks 4.866        
cufflinks 1.54        
cufflinks 10.875     High  
cufflinks 19.896     High High
cufflinks 2.612        
cufflinks 1.471        
cufflinks 5.222        
cufflinks 18.653     High High
cufflinks 2.366        
cufflinks 4.002        
cufflinks 2.041        

0 Strain