Gene : Misin13G105500 M. sinensis v7.1
Defline:  (1 of 2) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  1055
Name:  ? Misin13G105500 Secondary Identifier:  ? PAC:40513454
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Msinensis CAROTENOID-PWY Miscanthus sinensis pathologic  
Msinensis PWY-5943 Miscanthus sinensis pathologic  
Msinensis PWY-5947 Miscanthus sinensis pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Misin13G105500 0.5kb upstream 0.5kb upstream 15576 true Chr13: 44201808-44217383 Miscanthus sinensis
Misin13G105500 0.5kb upstream 0.5kb upstream 500 false Chr13: 44216884-44217383 Miscanthus sinensis
Misin13G105500 0.5kb downstream 0.5kb downstream 15576 true Chr13: 44201308-44216883 Miscanthus sinensis
Misin13G105500 0.5kb downstream 0.5kb downstream 500 false Chr13: 44201308-44201807 Miscanthus sinensis
Misin13G105500 1.0kb upstream 1.0kb upstream 16076 true Chr13: 44201808-44217883 Miscanthus sinensis
Misin13G105500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44216884-44217883 Miscanthus sinensis
Misin13G105500 1.0kb downstream 1.0kb downstream 16076 true Chr13: 44200808-44216883 Miscanthus sinensis
Misin13G105500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44200808-44201807 Miscanthus sinensis
Misin13G105500 2.0kb upstream 2.0kb upstream 17076 true Chr13: 44201808-44218883 Miscanthus sinensis
Misin13G105500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44216884-44218883 Miscanthus sinensis
Misin13G105500 2.0kb downstream 2.0kb downstream 17076 true Chr13: 44199808-44216883 Miscanthus sinensis
Misin13G105500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44199808-44201807 Miscanthus sinensis
Misin13G105500 5.0kb upstream 5.0kb upstream 20076 true Chr13: 44201808-44221883 Miscanthus sinensis
Misin13G105500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44216884-44221883 Miscanthus sinensis
Misin13G105500 5.0kb downstream 5.0kb downstream 20076 true Chr13: 44196808-44216883 Miscanthus sinensis
Misin13G105500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44196808-44201807 Miscanthus sinensis
Misin13G105500 10.0kb upstream 10.0kb upstream 25076 true Chr13: 44201808-44226883 Miscanthus sinensis
Misin13G105500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44216884-44226883 Miscanthus sinensis
Misin13G105500 10.0kb downstream 10.0kb downstream 25076 true Chr13: 44191808-44216883 Miscanthus sinensis
Misin13G105500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44191808-44201807 Miscanthus sinensis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187284 5267 Panicoideae View MSA
124570588 5269 Grass View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain