Gene : Glyma.13G106200 G. max Wm82.a2.v1

Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Genomic Order:  1062
Name:  ? Glyma.13G106200 Secondary Identifier:  ? PAC:30506080

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G106200 0.5kb upstream 0.5kb upstream 3405 true Chr13: 22052964-22056368 Glycine max
Glyma.13G106200 0.5kb upstream 0.5kb upstream 500 false Chr13: 22055869-22056368 Glycine max
Glyma.13G106200 0.5kb downstream 0.5kb downstream 3405 true Chr13: 22052464-22055868 Glycine max
Glyma.13G106200 0.5kb downstream 0.5kb downstream 500 false Chr13: 22052464-22052963 Glycine max
Glyma.13G106200 1.0kb upstream 1.0kb upstream 3905 true Chr13: 22052964-22056868 Glycine max
Glyma.13G106200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22055869-22056868 Glycine max
Glyma.13G106200 1.0kb downstream 1.0kb downstream 3905 true Chr13: 22051964-22055868 Glycine max
Glyma.13G106200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22051964-22052963 Glycine max
Glyma.13G106200 2.0kb upstream 2.0kb upstream 4905 true Chr13: 22052964-22057868 Glycine max
Glyma.13G106200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22055869-22057868 Glycine max
Glyma.13G106200 2.0kb downstream 2.0kb downstream 4905 true Chr13: 22050964-22055868 Glycine max
Glyma.13G106200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22050964-22052963 Glycine max
Glyma.13G106200 5.0kb upstream 5.0kb upstream 7905 true Chr13: 22052964-22060868 Glycine max
Glyma.13G106200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22055869-22060868 Glycine max
Glyma.13G106200 5.0kb downstream 5.0kb downstream 7905 true Chr13: 22047964-22055868 Glycine max
Glyma.13G106200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22047964-22052963 Glycine max
Glyma.13G106200 10.0kb upstream 10.0kb upstream 12905 true Chr13: 22052964-22065868 Glycine max
Glyma.13G106200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22055869-22065868 Glycine max
Glyma.13G106200 10.0kb downstream 10.0kb downstream 12905 true Chr13: 22042964-22055868 Glycine max
Glyma.13G106200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22042964-22052963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.7008 0.0 97.164 High  
cufflinks 51.5789 0.0 145.066 High  
cufflinks 30.613 0.0 82.7032 High Low
cufflinks 42.4588 0.0 117.104 High  
cufflinks 61.8136 0.0 177.54 High  
cufflinks 38.9002 0.0 106.571 High  
cufflinks 93.7686 0.0 285.69 High High
cufflinks 38.2304 0.0 104.671 High  
cufflinks 39.4718 0.0 108.286 High  
cufflinks 17.137     High  
cufflinks 4.66       Low
cufflinks 22.784     High  
cufflinks 35.814     High High
cufflinks 52.334     High High
cufflinks 7.234     High Low
cufflinks 20.827     High  
cufflinks 9.638     High  
cufflinks 24.885     High  
cufflinks 29.581     High  
cufflinks 18.706     High  
cufflinks 7.937     High Low
cufflinks 19.843     High  
cufflinks 25.872     High  
cufflinks 6.924     High Low
cufflinks 20.719     High  
cufflinks 7.111     High Low

0 Strain