Gene : Glyma.13G144300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  1443
Name:  ? Glyma.13G144300 Secondary Identifier:  ? PAC:30503371
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G144300 0.5kb upstream 0.5kb upstream 7855 true Chr13: 25685807-25693661 Glycine max
Glyma.13G144300 0.5kb upstream 0.5kb upstream 500 false Chr13: 25693162-25693661 Glycine max
Glyma.13G144300 0.5kb downstream 0.5kb downstream 7855 true Chr13: 25685307-25693161 Glycine max
Glyma.13G144300 0.5kb downstream 0.5kb downstream 500 false Chr13: 25685307-25685806 Glycine max
Glyma.13G144300 1.0kb upstream 1.0kb upstream 8355 true Chr13: 25685807-25694161 Glycine max
Glyma.13G144300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25693162-25694161 Glycine max
Glyma.13G144300 1.0kb downstream 1.0kb downstream 8355 true Chr13: 25684807-25693161 Glycine max
Glyma.13G144300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25684807-25685806 Glycine max
Glyma.13G144300 2.0kb upstream 2.0kb upstream 9355 true Chr13: 25685807-25695161 Glycine max
Glyma.13G144300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25693162-25695161 Glycine max
Glyma.13G144300 2.0kb downstream 2.0kb downstream 9355 true Chr13: 25683807-25693161 Glycine max
Glyma.13G144300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25683807-25685806 Glycine max
Glyma.13G144300 5.0kb upstream 5.0kb upstream 12355 true Chr13: 25685807-25698161 Glycine max
Glyma.13G144300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25693162-25698161 Glycine max
Glyma.13G144300 5.0kb downstream 5.0kb downstream 12355 true Chr13: 25680807-25693161 Glycine max
Glyma.13G144300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25680807-25685806 Glycine max
Glyma.13G144300 10.0kb upstream 10.0kb upstream 17355 true Chr13: 25685807-25703161 Glycine max
Glyma.13G144300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25693162-25703161 Glycine max
Glyma.13G144300 10.0kb downstream 10.0kb downstream 17355 true Chr13: 25675807-25693161 Glycine max
Glyma.13G144300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25675807-25685806 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303682 5265 Fabidae View MSA
124072219 5270 Rosid View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.41388 0.0 17.6091   Low
cufflinks 7.12045 0.0 27.8663    
cufflinks 7.96762 0.0 31.1671    
cufflinks 5.81858 0.0 24.1595    
cufflinks 5.68945 0.0 24.1719    
cufflinks 5.52057 0.0 22.8767    
cufflinks 3.68975 0.0 16.1056   Low
cufflinks 8.87381 0.0 33.5824   High
cufflinks 7.48495 0.0 28.8795    
cufflinks 0.409        
cufflinks 1.529       High
cufflinks 0.593        
cufflinks 0.321       Low
cufflinks 0.415        
cufflinks 0.427        
cufflinks 0.568        
cufflinks 0.957        
cufflinks 0.556        
cufflinks 0.802        
cufflinks 0.533        
cufflinks 1.145       High
cufflinks 0.586        
cufflinks 0.427        
cufflinks 1.994       High
cufflinks 0.577        
cufflinks 0.732        

0 Strain