Gene : Glyma.13G144600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21717:SF21 - PROTEIN TRF-LIKE 8 Genomic Order:  1446
Name:  ? Glyma.13G144600 Secondary Identifier:  ? PAC:30504069
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G144600 0.5kb upstream 0.5kb upstream 6066 true Chr13: 25727169-25733234 Glycine max
Glyma.13G144600 0.5kb upstream 0.5kb upstream 500 false Chr13: 25727169-25727668 Glycine max
Glyma.13G144600 0.5kb downstream 0.5kb downstream 6066 true Chr13: 25727669-25733734 Glycine max
Glyma.13G144600 0.5kb downstream 0.5kb downstream 500 false Chr13: 25733235-25733734 Glycine max
Glyma.13G144600 1.0kb upstream 1.0kb upstream 6566 true Chr13: 25726669-25733234 Glycine max
Glyma.13G144600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25726669-25727668 Glycine max
Glyma.13G144600 1.0kb downstream 1.0kb downstream 6566 true Chr13: 25727669-25734234 Glycine max
Glyma.13G144600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25733235-25734234 Glycine max
Glyma.13G144600 2.0kb upstream 2.0kb upstream 7566 true Chr13: 25725669-25733234 Glycine max
Glyma.13G144600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25725669-25727668 Glycine max
Glyma.13G144600 2.0kb downstream 2.0kb downstream 7566 true Chr13: 25727669-25735234 Glycine max
Glyma.13G144600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25733235-25735234 Glycine max
Glyma.13G144600 5.0kb upstream 5.0kb upstream 10566 true Chr13: 25722669-25733234 Glycine max
Glyma.13G144600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25722669-25727668 Glycine max
Glyma.13G144600 5.0kb downstream 5.0kb downstream 10566 true Chr13: 25727669-25738234 Glycine max
Glyma.13G144600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25733235-25738234 Glycine max
Glyma.13G144600 10.0kb upstream 10.0kb upstream 15566 true Chr13: 25717669-25733234 Glycine max
Glyma.13G144600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25717669-25727668 Glycine max
Glyma.13G144600 10.0kb downstream 10.0kb downstream 15566 true Chr13: 25727669-25743234 Glycine max
Glyma.13G144600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25733235-25743234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307792 5265 Fabidae View MSA
124070944 5270 Rosid View MSA
123748062 5271 Pentapetalae View MSA
122796480 5272 Eudicot View MSA
122050200 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121311795 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.888 0.0 60.886   High
cufflinks 3.4755 0.0 24.0974   Low
cufflinks 4.9393 0.0 29.0896    
cufflinks 7.42396 0.0 43.9874    
cufflinks 5.85428 0.0 36.4971    
cufflinks 10.4956 0.0 53.1617    
cufflinks 12.7418 0.0 65.8828   High
cufflinks 5.16613 0.0 27.9887    
cufflinks 6.31039 0.0 38.3946    
cufflinks 0.459        
cufflinks 0.223       Low
cufflinks 0.31        
cufflinks 0.374        
cufflinks 0.223       Low
cufflinks 0.51        
cufflinks 0.718       High
cufflinks 0.688       High
cufflinks 0.439        
cufflinks 0.29        
cufflinks 0.617        
cufflinks 0.265        
cufflinks 0.59        
cufflinks 0.861       High
cufflinks 0.159       Low
cufflinks 0.548        
cufflinks 0.527        

0 Strain